Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03128 ATGGAGAGAAAGTTCTGGGCTTTAGCTTTCATCTTGTGGTTCTTGTTGGTTCATCCACTATGGCTCATTTCTGCTAACATGGAAGGCGATGCTTTACATAGTCTGAGGACAAATTTACAGGATCCTAACAATGTTTTGCAAAGTTGGGATCCCACACTTGTGAATCCTTGCACATGGTTTCATGTAACATGCAACAATGATAACAGTGTCATAAGAGTTGATCTTGGAAATGCTGGTTTGTCTGGTCAACTTGTTACACAACTTGGTCAACTCAAGAATTTGCAGTATTTGGAACTTTACAGCAATAACATTACTGGCCCTATTCCAAGTGACCTGGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTACCTAAATAGTTTCACTGGCCCTATCCCTGATTCATTGGGAAAGTTGTCGAAATTGCGGTTTCTCCGGCTTAACAACAACAGCTTGACGGGCCCTATTCCAATGTCACTGACTAATATTTCATCTCTTCAAGTTCTGGATTTGTCTAATAACCATCTGTCTGGTGTGGTTCCTGATAATGGCTCCTTCTCATTATTCACTCCCATCAGTTTTGCCAACAACTTGGGTCTATGTGGACCAGTCACTGGACATCCTTGTCCAGGCTCTCCTCCATTTTCGCCTCCTCCCCCTTTTGTGCCTCCTCCCCCAATTTCTGCCCCTGGAGGTGGTAGTGCCACTGGGGCAATAGCCGGAGGAGTTGCTGCTGGCGCTGCTCTATTATTTGCTGCTCCTGCAATTGCATTTGCATGGTGGCGTCGAAGAAAGCCGCAAGAATTTTTCTTTGATGTGCCTGCTGAGGAGGATCCCGAGGTCCATCTTGGGCAACTTAAGAGGTTCTCACTACGTGAACTGCAAGTTGCGACAGACAGTTTCAGCAATAAGAACATTCTCGGGAGAGGAGGATTTGGTAAGGTGTACAAAGGACGTCTGGCAGATGGTTCATTGGTCGCTGTGAAAAGATTGAAAGAGGAACGCACACCTGGTGGGGAGCTTCAGTTTCAAACTGAAGTAGAGATGATCAGCATGGCTGTGCATAGAAATCTCCTACGTTTACGTGGATTTTGTATGACACCGACAGAAAGGCTACTTGTTTATCCTTACATGGCTAACGGAAGTGTTGCCTCATGCTTAAGAGCCGACGATGATGGCAACCATGAGTTTGTCATTGATGAGTGTGACATTCTGGATGAAGTTTCCATAGACGACGAAGACCTTCCAGATGCTTATGATGACCAATATTCTGATTCCGAACATTCCGTTGACGTCGAGGATTCTGTGCATACATTCATTCGTCATAATGAGGAGTTGTACTCAGCTGCATGCAGACCAAGCGATTCAACAGAGCACAAGATTCGGGAGTTGTACTCAGCTGCTTGCAGCCCAAGCGATGCAACATTGGTGGCAACAGGGGGTCAAGATGACAGAGGATTTCTCTGGAATATTGGCAATGAAGTTTGGTATTCTGAGCTAAAGGGTCATAAGGATTCTGTATCTAGTTTAGCTTTTAGCCACGATGGACAGTTTCTTGCTTCGGGATGTTTAGGTGGAATTGTTCAAGTATGGGATGTTTTGGGAAATCTGAAAGGCACACTGGAGGGTCCTAGAGGGGGAATTGAGGTAAAAGAGGTTGTTCTTTTTGTTGCTTGTTATTCTGTGTTATTACAAAAATTCATTCGATATGATATCTTTCAGTGGCTTAGATGGCATCCGAGAGGACACATACTCTTAGCTGGTTCAGAGGATTCCACTGTTTGGATGTGGAATGCTGAAAGAGCTGCTTTTGCTAATATGTTTGTTGGTCATGGTGCTAGTGTGACCTGTGGTGATTTTACTCCTGATGGGAAAATAATATGTACCGGTTCAGAGGACGCAACTTTGAGAATCTCTTCTCTTCAGCGACACCCGTATCATGCTGAGGGACTAACATGCTTGTCAATAAGTTCATCATCAACCCTTGCCCTTACCGGTTCCGGTGCCAATCCCGATTCCAGTTCCAAGTATGGATCTGGATCTGCTCATATTGTGAATATCTCTACTGGGAAGGTTATTAATACCCCGATTTCTCATTCAGGGTCCATTGAATGTGTTGGCTTTTCACCAAGTGATTCCTGGGCTGCAATTGGGGGATTGGATAAAAAACTTGTCATCTGGGATGTAGAACATTCCTTATCCCGTTCCACTTGTAACCATGAGGGTGGAGTGACATGTTTGGCGTGGCTTGATGCTTCGAATTTGGCCACTGGATGCTCGGATGGAAATGTAAGATTATGGGACAGCCGGTCCGGTGAATGCACAACCACATTCCGGGGGCATTCAAATGCCATTTATGCTCTCTGTGTGTCTGCTGATAACAAGTACCTTGTTTCGGCTTCATACGATGGAACAGCTCGTGTCTTTGAGCTTGGCAGTTAG 2442 0.4505 MERKFWALAFILWFLLVHPLWLISANMEGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAGLSGQLVTQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLGLCGPVTGHPCPGSPPFSPPPPFVPPPPISAPGGGSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRADDDGNHEFVIDECDILDEVSIDDEDLPDAYDDQYSDSEHSVDVEDSVHTFIRHNEELYSAACRPSDSTEHKIRELYSAACSPSDATLVATGGQDDRGFLWNIGNEVWYSELKGHKDSVSSLAFSHDGQFLASGCLGGIVQVWDVLGNLKGTLEGPRGGIEVKEVVLFVACYSVLLQKFIRYDIFQWLRWHPRGHILLAGSEDSTVWMWNAERAAFANMFVGHGASVTCGDFTPDGKIICTGSEDATLRISSLQRHPYHAEGLTCLSISSSSTLALTGSGANPDSSSKYGSGSAHIVNISTGKVINTPISHSGSIECVGFSPSDSWAAIGGLDKKLVIWDVEHSLSRSTCNHEGGVTCLAWLDASNLATGCSDGNVRLWDSRSGECTTTFRGHSNAIYALCVSADNKYLVSASYDGTARVFELGS 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03128 813 Pfam Protein tyrosine and serine/threonine kinase 304 392 IPR001245 GO:0004672|GO:0006468
Adu09g03128 813 CDD WD40 499 810 - -
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats profile. 576 607 IPR001680 GO:0005515
Adu09g03128 813 Gene3D Ribonuclease Inhibitor 24 211 IPR032675 -
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats profile. 500 533 IPR001680 GO:0005515
Adu09g03128 813 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 14 390 IPR031048 GO:0004675|GO:0005102|GO:0006468
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 778 813 - -
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 737 773 - -
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats profile. 737 777 IPR001680 GO:0005515
Adu09g03128 813 ProSiteProfiles Protein kinase domain profile. 301 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03128 813 Pfam Leucine Rich Repeat 165 182 IPR001611 GO:0005515
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats profile. 696 737 IPR001680 GO:0005515
Adu09g03128 813 SUPERFAMILY L domain-like 29 190 - -
Adu09g03128 813 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Adu09g03128 813 SUPERFAMILY Protein kinase-like (PK-like) 279 392 IPR011009 -
Adu09g03128 813 SMART WD40_4 731 768 IPR001680 GO:0005515
Adu09g03128 813 SMART WD40_4 771 810 IPR001680 GO:0005515
Adu09g03128 813 SMART WD40_4 454 490 IPR001680 GO:0005515
Adu09g03128 813 SMART WD40_4 493 532 IPR001680 GO:0005515
Adu09g03128 813 SMART WD40_4 601 640 IPR001680 GO:0005515
Adu09g03128 813 SMART WD40_4 689 728 IPR001680 GO:0005515
Adu09g03128 813 SMART WD40_4 560 598 IPR001680 GO:0005515
Adu09g03128 813 ProSitePatterns Trp-Asp (WD) repeats signature. 755 769 IPR019775 -
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats profile. 608 638 IPR001680 GO:0005515
Adu09g03128 813 SUPERFAMILY WD40 repeat-like 497 809 IPR036322 GO:0005515
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats profile. 778 813 IPR001680 GO:0005515
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 696 730 - -
Adu09g03128 813 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 500 533 - -
Adu09g03128 813 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Adu09g03128 813 ProSitePatterns Trp-Asp (WD) repeats signature. 715 729 IPR019775 -
Adu09g03128 813 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 390 - -
Adu09g03128 813 Pfam WD domain, G-beta repeat 772 809 IPR001680 GO:0005515
Adu09g03128 813 Pfam WD domain, G-beta repeat 499 532 IPR001680 GO:0005515
Adu09g03128 813 Pfam WD domain, G-beta repeat 608 638 IPR001680 GO:0005515
Adu09g03128 813 Pfam WD domain, G-beta repeat 739 768 IPR001680 GO:0005515
Adu09g03128 813 Pfam WD domain, G-beta repeat 692 728 IPR001680 GO:0005515
Adu09g03128 813 Pfam WD domain, G-beta repeat 576 598 IPR001680 GO:0005515
Adu09g03128 813 Gene3D - 455 812 IPR015943 GO:0005515
Adu09g03128 813 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03128 Adu-Chr9 119193984 119206246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03128 8 388 Receptor kinase-like Gene Family AT1G71830 88.021 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Adu09g03128 PK_Tyr_Ser-Thr 1.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03128 K13418 - adu:107467788 795.423