Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03096 ATGTTTGCTATGACCTCCATCAAAGGTATCGGAAGGCGATTTGCTAACATCTGTTGTAAGAAGGCCGATATCGACATGAACAAGAGAGCTGGTGAACTGAGTGCTGCTGAGCTTGATAATCTGATGACTGTGGTTGCCAACCCAAGGCAATTCAAGATCCCAGATTGGTTCCTCAACAGGAAGAAGGACTACAAGGATGGCAAGTACTCCCAGGTTGTGTCCAACGCTCTCGACATGAAGCTCAGGGATGACTTGGAGAGACTCAAGAAAATCAGAAATCACCGTGGTTTGAGGCACTACTGGGGTCTCCGAGTTCGTGGCCAACACACCAAGACCACTGGCCGTAGGGGAAAGACTGTTGGTGTCTCGAAGAAGCGTTAA 381 0.4882 MFAMTSIKGIGRRFANICCKKADIDMNKRAGELSAAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03096 126 Gene3D - 1 54 - -
Adu09g03096 126 Gene3D 30s ribosomal protein s13, domain 2 66 116 IPR027437 -
Adu09g03096 126 ProSitePatterns Ribosomal protein S13 signature. 95 108 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu09g03096 126 PIRSF RPS13p_RPS13a_RPS18e_RPS13o 1 126 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu09g03096 126 Pfam Ribosomal protein S13/S18 2 116 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu09g03096 126 PANTHER 40S RIBOSOMAL PROTEIN S18-RELATED 1 126 - -
Adu09g03096 126 ProSiteProfiles Ribosomal protein S13 family profile. 1 119 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu09g03096 126 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 1 126 - -
Adu09g03096 126 SUPERFAMILY S13-like H2TH domain 2 126 IPR010979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03096 Adu-Chr9 118748734 118750352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03096 1 126 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 94.444 7.42e-89 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03096 K02964 - ini:109163819 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03096 09 118748734 118750352 Adu09g03096 09 118748734 118750352 ECH