Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03090 ATGGGGTGTGTTCAGGCCAAGACACTTGAAGGTCCTGCTCATGAACCCAAGGGACTAGACAGGCTCAAATTGGAAAATGGGTATGTGTCAAATTCTGATTTTGTTGCTCACAGAAGATCCACTGGTCAAAAGTATGAACCTATGGAGGATGCTAATGGTAGGCATCATCATCATCATCAGAAGAGAGAACAACCTCAACCCAGAAACCTTGCAAGAGTTAATGAGCTTGCTGCTGTTCCTGGCGGCAACAATGGTGAAAGTGGCAAGGGGAAAGGGGGTGTTACTAGAGAGAGGAAGAAGAGAGAATTGGCAAAGAAGAAGACTTTTGAGGATGACTATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAATGTTCCTGCTCAAGTCTTTGGTGGATTGGTCCCAAAGAGTGCTGAATCCTACAAAATGATTGATAAGGTAGGACAAGGAACATACAGCAATGTCTATAAAGCTCTAGATCGGGACACCGGAGAAATTGTTGCCCTAAAAAAGGTTCGCTTCAATACATCAGAGCCCGAAAGCATTAAATTTATGGCAAGAGAAATCTTGATACTACAAAGATTGGATCATCCTAATGTGCTAAAACTTAAAGGATTAGCCACTTCAAGAATGCAATACAGTATATATCTAGTTTTTGACTTCATGCAAACGGATTTGACAAGAATTATCTCTCATTCTGAAGAGAGGCTAACCGAGCCGCAGGTCAAGTGCTATATGCAGCAATTGCTTTCTGGTCTGCAGCATTGCCATGAGAGGGGAATTTTACATCGAGATATAAAGGGATCAAACCTTTTGATTGATAGAAATGGAATGCTTAAGATTGCAGATTTTGGGCTAGCCAACTATTATAGTCCAAACCATGAGCATCCTCTCACAAGCCGGGTCGTGACACTCTGGTATAGAGCCCCTGAGTTGCTGTTAGGTGCCACGGATTATGGAGTTGGTATTGATCTATGGAGTGCTGGATGCCTCCTTGCAGAAATGTTCACCGGAATTCCACTCATGCCTGGCCGAACAGAGGTTGAGCAACTTCATAGAATTTTCAGATTATGTGGCACACCATCAGAGGAGTACTGGAAAAAATTTAAAATATCTGCATCATTTAGACCTCCAAGGTCGTATCGACCTAGCTTTCTAGAAACTTTCAGGGATCTCCCTCCATCTTCTTTGGGGCTTTTATGTACCCTCCTTGCTTTGGAACCGGCATTCCGTGGAACTGCATCTAAAGCTCTTAACAATCCGTTTTTCTTTACAAGCCCGTTGGCCTGTGATCTCTCTGGTTTGCCTGTAATCCACAGAGAAGAAGATGAACATGATCAAGCCAAAGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATACCTGGAGCGTCGCAAGAGTCTAGCTCCCAAGAGGCAGATAGAACATACTGTGTCTAACAAGGAGGATTCAAGAAGGAATGTGGAACCTGAAACTTACATTCCAAGCGAAGAACCGGGTAGCGCAACCATAAGCAGTACCTCATCTAGTGTAAACCCTGGTGTGGCTAAGGAGCAGTTTCCACTTTTGGCTTCAGATAAAAAGGTGGCCCCAAAATACCATCACCATGGCAGTGTTGGTGAAATTACAAGGTACCTTCCTCCATTACCCAAGTCAAAACCAAAAGCAACCCAGAATGATGACTACAACAGATTCAGTTTCAGGAGTGCTTCTACCAGAGAATTTAGAAACTTTAAGAGGGAGGACTATTTACTCTTTGAAATTGATTAG 1788 0.4318 MGCVQAKTLEGPAHEPKGLDRLKLENGYVSNSDFVAHRRSTGQKYEPMEDANGRHHHHHQKREQPQPRNLARVNELAAVPGGNNGESGKGKGGVTRERKKRELAKKKTFEDDYEMVDGWPKWLVDNVPAQVFGGLVPKSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREILILQRLDHPNVLKLKGLATSRMQYSIYLVFDFMQTDLTRIISHSEERLTEPQVKCYMQQLLSGLQHCHERGILHRDIKGSNLLIDRNGMLKIADFGLANYYSPNHEHPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFTGIPLMPGRTEVEQLHRIFRLCGTPSEEYWKKFKISASFRPPRSYRPSFLETFRDLPPSSLGLLCTLLALEPAFRGTASKALNNPFFFTSPLACDLSGLPVIHREEDEHDQAKEQIKYMNSKIRRSRTYLERRKSLAPKRQIEHTVSNKEDSRRNVEPETYIPSEEPGSATISSTSSSVNPGVAKEQFPLLASDKKVAPKYHHHGSVGEITRYLPPLPKSKPKATQNDDYNRFSFRSASTREFRNFKREDYLLFEID 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03090 595 MobiDBLite consensus disorder prediction 548 567 - -
Adu09g03090 595 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Adu09g03090 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Adu09g03090 595 ProSiteProfiles Protein kinase domain profile. 143 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03090 595 PANTHER CYCLIN-DEPENDENT KINASE 1 537 - -
Adu09g03090 595 Gene3D Transferase(Phosphotransferase) domain 1 226 486 - -
Adu09g03090 595 MobiDBLite consensus disorder prediction 472 498 - -
Adu09g03090 595 MobiDBLite consensus disorder prediction 39 56 - -
Adu09g03090 595 SMART serkin_6 143 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03090 595 MobiDBLite consensus disorder prediction 472 519 - -
Adu09g03090 595 MobiDBLite consensus disorder prediction 1 101 - -
Adu09g03090 595 Gene3D Phosphorylase Kinase; domain 1 134 225 - -
Adu09g03090 595 Pfam Protein kinase domain 143 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03090 595 SUPERFAMILY Protein kinase-like (PK-like) 138 429 IPR011009 -
Adu09g03090 595 PANTHER CELL DIVISION PROTEIN KINASE 1 537 - -
Adu09g03090 595 MobiDBLite consensus disorder prediction 504 519 - -
Adu09g03090 595 Coils Coil 440 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03090 Adu-Chr9 118712134 118715496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03090 128 458 Core Cell Cycle Gene Families AT5G10270 44.413 1.64e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Adu09g03090 Pkinase 7.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03090 K08819 - gmx:100776854 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03405 05 106415304 106420088 Adu09g03090 09 118712134 118715496 ECH
Adu09g03090 09 118712134 118715496 Adu09g03090 09 118712134 118715496 ECH