Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03087 ATGGAAAAGGCACTCCAAGCCGTCTTGGCCGCCGCCGGCACCTTCTTTGTCCACGACAACCGCGCTACCAACCCAACCCGAACCCGAACCCGACCCCTCCCAAACACTGACCAATCGTCCGTCTCCGTCGTAGATGCCAGCTGGTCCTCCGATCCCAACCTCAAGATCTCCCTTACCGAGCTCGCACGCGCCACTGAAAACTTCTCTCCAAATCTCATCGTCGGCGACGGCAGCTTTGGCCTCGTCTATAAGGCCCGCCTCAACGACGGCACCGTCGTCGCCGTCAAGAAGCTCTCCCCGGACGCTTTCCAAGGCTTCCGCGAGTTCCAGGCCGAGATGGAAACTCTAAGCAAGCTCGATCACCCAAACATCGTCAAGATCCTCGGCTACTGGTCCTCCGGGCCCGAACGCTTACTCGTCTACGAGTTCATCGAACGGGGAAACCTCGATCAGTGGCTCCACGAGCCCACCACTGGGCCCAACGACCACATCTCCCTCAGCGACCTCCGTTTACCTCTGTCATGGGAAACCAGGGTCAACATCATTAGAGGCGTGGCCCGCGGGCTTTACTATCTCCACGGGCTTGATAAGCCCATCATACACAGGGACATCAAAGCCAGTAACGTGTTATTGGACTCCGAGTTCAAGGCCCATATAGCTGATTTCGGGCTTGCTCGGAGGATTGACACGTCCAAATATTCACACGTGTCAACGCAGTTTGCTGGGACCATGGGCTACATGCCCCCGGAGTATGTTGCTGGGGCCAATGTGGCCAACCAGAAGGTGGATGTGTATAGCTTTGGGATTTTGATGCTTGAGACGGGCTCAGGGCGCAGGACTAATTTGCCAGTGAAGTTAGGGGAGGAAGATATTGGGCTGGTCCAGTGGGCCCGGAAGATGAAGGAGCGAAATGCTGAGATGAATATTGTTGATGTGAATATTTCAAGGGAAGGTTTAAGGGAAGAGTGTGTTAAAGAGTATGTGAGGATTGCTTGCATGTGCACTGCTGAGTTGCAGAAGGAAAGGCCTGAGATGCCTGAGGTTGTTCGCTTGTTGGATTCCATGCCGCTCTGA 1074 0.5503 MEKALQAVLAAAGTFFVHDNRATNPTRTRTRPLPNTDQSSVSVVDASWSSDPNLKISLTELARATENFSPNLIVGDGSFGLVYKARLNDGTVVAVKKLSPDAFQGFREFQAEMETLSKLDHPNIVKILGYWSSGPERLLVYEFIERGNLDQWLHEPTTGPNDHISLSDLRLPLSWETRVNIIRGVARGLYYLHGLDKPIIHRDIKASNVLLDSEFKAHIADFGLARRIDTSKYSHVSTQFAGTMGYMPPEYVAGANVANQKVDVYSFGILMLETGSGRRTNLPVKLGEEDIGLVQWARKMKERNAEMNIVDVNISREGLREECVKEYVRIACMCTAELQKERPEMPEVVRLLDSMPL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03087 357 CDD STKc_IRAK 74 355 - -
Adu09g03087 357 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 22 354 - -
Adu09g03087 357 Pfam Protein tyrosine and serine/threonine kinase 74 352 IPR001245 GO:0004672|GO:0006468
Adu09g03087 357 Gene3D Transferase(Phosphotransferase) domain 1 144 356 - -
Adu09g03087 357 PIRSF ILK 49 357 - -
Adu09g03087 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Adu09g03087 357 Gene3D Phosphorylase Kinase; domain 1 32 143 - -
Adu09g03087 357 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Adu09g03087 357 PANTHER OS01G0253100 PROTEIN 22 354 IPR045271 GO:0004714|GO:0006468
Adu09g03087 357 ProSiteProfiles Protein kinase domain profile. 68 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03087 357 SMART serkin_6 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g03087 357 SUPERFAMILY Protein kinase-like (PK-like) 39 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03087 Adu-Chr9 118692931 118694004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03087 44 352 Receptor kinase-like Gene Family AT5G07280 43.871 7.24e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Adu09g03087 PK_Tyr_Ser-Thr 3.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03087 - - lang:109335579 504.212