Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03085 ATGGAGATTGTCCATTCTCTGTCACCAGACTTGAGTCATCTTCGTCACCGCAACCACAGCACTTCGACCCAATACCTACGCTACGGTCACAGTTCACCGGAAAACCTCTTATCCGGCGCCGGAGAGGGGCTTCTCTTCCAACAGGAAACTGATATTAATAGCATTGGAGGATCTTCTGTCCCGTTTGTGCTGCCACAGGTTGTAAGCATTTCAGCAGTTACTCGGATGGATCCTAATGTAGAAGAAGAGTTGCCCCAATACATACATATAAATCAGAATGAATTTTTTATACGAAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGATTGCAAATATAATGTTGACGACCCTGATAGTGCATGTGGGGACGGCTGCCTCAATGTTTTAACCAGCACCGAATGCACTCCTGGATATTGCCCATGTGGTGACCTCTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTTAAAACTGAAGGCCGTGGTTGGGGTCTTTTGGCTGATGAGAACATTAAGGCGGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGCTTATGAAATTCAAGGTCTAACAGATGCATTTATCATTTGCCTTAATGCCTTTGAATCTATTGATGCAACAAGAAAGGGAAGTCTTGGCAGATTTATAAATCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCTTGGGCGAAATAAGAGTTGGAATATTTGCGAAATATGATATTCCTTTTGGAGCTGAATTGGCATATGACTATAATTTTGAATGGTTTGGGGGCACAAAGGTTCGCTGCCTCTGCGGTGCAGCTAGATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTCCAACAGGAAGATACTTATCTATGGGAAGATGATGATGACAGGTACTCTGTTGAGAAAATTCCTGTATATGACTCCGCGGAGGATGAATTGGGGACAGAAGTTCTTAAACGTATGAACTCAGACAGCTCTGGAAATGATTTTAATGGAAGAATAGGATCCTCCGTGGATAATACACTGAAAGCTGAGCAGCTACCAGAGTCCGGTGCTTTCAGTATTCCCCTTAATTTGGCTCAGATGAAGGATTTAGATGTCAAGAAGATTAAAACTGAAGTAGTAAGCGAGGATATGAAATTGGATTCTGAAGATACTGAACAGGCCTTCTCCCAAAAGAATGCAATGATCTCGCGTATCCGAAGTAATAGTGCTGCCAGAAACTATCACCTTGGACCTGGGTCCATGTCTACTAAACGATCCAAGGCATATCGTGGCAGAAAGTTAAAGAATCTTGTTCAGAAGAAAGTTGATGCCAAGTTTGCCGCTGGACTCTTGGCTTCAAAGGAAGCACAAGAGGAGATTCTAAAATATGAGGAAGTCAAGAATAATGCTACTTCTGGTCTCGATTCCTTGTACGATGAAATAAGGCCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCTACCTCTGTAGCAGAGAAGTGGATTCAAGCTTGCTGCCTAAAATTGAAGGCAGAGTTTGATCTTTACTCCTCAATTGTCAAAAACGTGGCTTGCACTGCTCAAAGGTCTAAACCTCCCCCAGAAGCTGATAATGAAAACGAAATTAGGCTGTTGATGGGTTGA 1704 0.4237 MEIVHSLSPDLSHLRHRNHSTSTQYLRYGHSSPENLLSGAGEGLLFQQETDINSIGGSSVPFVLPQVVSISAVTRMDPNVEEELPQYIHINQNEFFIRRHKKQKEEDIAICDCKYNVDDPDSACGDGCLNVLTSTECTPGYCPCGDLCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFVIEYCGEVISWKEAKRRSQAYEIQGLTDAFIICLNAFESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKYDIPFGAELAYDYNFEWFGGTKVRCLCGAARCSGFLGAKSRGFQQEDTYLWEDDDDRYSVEKIPVYDSAEDELGTEVLKRMNSDSSGNDFNGRIGSSVDNTLKAEQLPESGAFSIPLNLAQMKDLDVKKIKTEVVSEDMKLDSEDTEQAFSQKNAMISRIRSNSAARNYHLGPGSMSTKRSKAYRGRKLKNLVQKKVDAKFAAGLLASKEAQEEILKYEEVKNNATSGLDSLYDEIRPAIEEHERDSQDSVSTSVAEKWIQACCLKLKAEFDLYSSIVKNVACTAQRSKPPPEADNENEIRLLMG 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03085 567 SUPERFAMILY SET domain 83 296 IPR046341 -
Adu09g03085 567 MobiDBLite consensus disorder prediction 548 567 - -
Adu09g03085 567 SMART shorttest3 106 158 IPR006560 GO:0005634|GO:0018024
Adu09g03085 567 SMART set_7 159 282 IPR001214 GO:0005515
Adu09g03085 567 ProSiteProfiles Post-SET domain profile. 283 299 IPR003616 -
Adu09g03085 567 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 77 509 - -
Adu09g03085 567 SMART PostSET_3 283 299 IPR003616 -
Adu09g03085 567 ProSiteProfiles AWS domain profile. 106 157 IPR006560 GO:0005634|GO:0018024
Adu09g03085 567 PANTHER SET DOMAIN PROTEINS 77 509 - -
Adu09g03085 567 Pfam AWS domain 118 156 IPR006560 GO:0005634|GO:0018024
Adu09g03085 567 ProSiteProfiles SET domain profile. 159 276 IPR001214 GO:0005515
Adu09g03085 567 Pfam SET domain 170 276 IPR001214 GO:0005515
Adu09g03085 567 Gene3D SET domain 67 315 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03085 Adu-Chr9 118683838 118692013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03085 141 298 C2H2 Transcription Factor Family AT2G23740 34.807 3.14e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu09g03085 SET 2.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03085 - - lang:109335575 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03085 09 118683838 118692013 Adu09g03085 09 118683838 118692013 ECH