Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03080 ATGATGCATCATCAGCATCATCACGATGATGTTTCTGCCTCTGTTCTTTGGGGTGGCCATAAAAGAGGGCGTCAAGAAGAAACTAATATTCATACTGCTGGTACATCTTCTCATAATCAATTGTTACAACATGTCACTACTCTTCATGCATCACAACTAAGTGGCAGCAGCGGCAGCAGCAGTGCAGGAACAACTTCAAGCGAAAGTAGTGCATCCTACGAAGAAACAGGGGAGAGAAAGAGGAAATACAGAGGAGTGAGGCAGAGACCATGGGGAAAATGGGCCGCAGAGATTCGAGACCCTCAAAAAGCAGCAAGAGTTTGGCTTGGAACCTTTGACACGGCAGAAGCGGCCGCAAGAGCTTACGATGAGGCAGCATTGAGGTTCAGAGGAAACAGAGCCAAACTCAACTTCCCTGAAAATGTTAGAGCAATCCCAGTACCACCACAACAAACAACCGTCGTTCAGGAGTCTCTGGTACCAGTTTTTCGGCCGGTGATGCAGGCGCCACGGTCTCCTCTTCAGTTCTCCTCTGAACAGATGATGAAGGACTACTGTCAGTATTCTGAGTTATTGAAGAGCTCCAGTGACCATTTTCATGGATTTGATCAGTGGCTTTACCATTCACAAATGAATTTGGCAACTCAAACTTCATTGTTATCATCAACGTCTTTGGCTTCGTCTTCGTTGCCGACTGAGTTTTCACAGTCTACGAGTCAATCCTCATCTGCTTCTTTTCCTCTACTGTTTTCTTCAGTTCAACAGCAACCAGGACAACAACCAGGGTTTTTCCGTCCACCGAGATATTATTCTGACAATACCAGAGGAGCAAGCGGCGGATTGAGTTTTCCACCAACTTCAACGTGGCCAGATACCCATGGCTATCCTCCTCCAAGTTGA 900 0.4656 MMHHQHHHDDVSASVLWGGHKRGRQEETNIHTAGTSSHNQLLQHVTTLHASQLSGSSGSSSAGTTSSESSASYEETGERKRKYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRAIPVPPQQTTVVQESLVPVFRPVMQAPRSPLQFSSEQMMKDYCQYSELLKSSSDHFHGFDQWLYHSQMNLATQTSLLSSTSLASSSLPTEFSQSTSQSSSASFPLLFSSVQQQPGQQPGFFRPPRYYSDNTRGASGGLSFPPTSTWPDTHGYPPPS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03080 299 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Adu09g03080 299 MobiDBLite consensus disorder prediction 50 72 - -
Adu09g03080 299 MobiDBLite consensus disorder prediction 275 289 - -
Adu09g03080 299 PANTHER DNA-BINDING DOMAIN 20 258 IPR044808 GO:0003700|GO:0009873
Adu09g03080 299 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Adu09g03080 299 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Adu09g03080 299 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Adu09g03080 299 MobiDBLite consensus disorder prediction 254 299 - -
Adu09g03080 299 CDD AP2 82 141 IPR001471 GO:0003700|GO:0006355
Adu09g03080 299 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 20 258 - -
Adu09g03080 299 Pfam AP2 domain 82 131 IPR001471 GO:0003700|GO:0006355
Adu09g03080 299 MobiDBLite consensus disorder prediction 50 86 - -
Adu09g03080 299 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Adu09g03080 299 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03080 Adu-Chr9 118624573 118626284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03080 23 147 AP2-EREBP Transcription Factor Family AT2G33710 52.800 7.35e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu09g03080 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03080 - - adu:107467893 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03516 05 107731767 107734263 Adu09g03080 09 118624573 118626284 PCT