Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03058 ATGCAGCTAGGAGACCCTACTGTGTTGGAAACCTCCACCGGGGAGGCCGCGGCGGCGGAGGGCGGCGGCGAGGCCATTGGTGGCGATGAGGGTGAGAAGATGAACTTTGGTGGTGGAAACCGGTGGCCCCGGCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATTCTGTGTTTCGAGATTCAAGTCTCAAGGGTCCACTCTGGGAAGAAGTTTCAAGGAAACTAGGAGAACTTGGATATCATCGAAGCGCAAAGAAGTGTAAAGAGAAATTTGAGAACGTTTATAAGTACCACAAGAGAACGAAAGAGAATCGAAGTGGAAAATCCGAAGGCAAAACCAAAACCTACAAATTCTTTGACCAATTGCAAGCTCTTGAGAATCATCAATTCACTCTCTCATACAACCCTACACCAAAGCCACAACCGCCACCCACTTTGCCAACAAACACACTCCCATTATTACCAACAAGTTCTAGTGACGCCACCACCACCACCACCACTGTTCCATCCACAAACCCTACACCACCACCAACCACCACCACAACTGTCGTTACCAACCCTAATAATCCATCGTCACAACAAAATATTAATAATATCAATAATACTGATAGTCGTGTGCAACATTCTTTGCCTATAATGAACAACCTTTTCTCTTCTACCTCGACTTCTTCCTCCACGGCCTCTGACGAGGACTTGGAGGAGAAGTACAGGAATAAGAGGAAATGGAAGGAGTACTTCAGGAGGCTGACTAGGCAGGTGTTGGCGAAGCAGGAGGAGATGCAGAAGAGATTCTTGGAAGCCATAGACAAGAGGGAGAGGGAGCAAGTTGCTCAGCAAGATGCATGGAGGATGCAAGAGATGACTAGGATCAATAGAGAGCACGACATTCTCGTTCAAGAACGATCAACCGCCGCCGCAAAAGACGCCGCCGTTATCGCATTCTTGCAAAAGTTATCCGGCCAACAACAAACTCCACCACCACAACCTCCAATCACAGTTTCCTTTGGAGCCAATTTCTTCCAACAACCAACACCGACACCGACACCAACACCAACACCGGTACAAGTACAACCACCACCACAACCACAGCCGCAACCGCAACCACAACCGCAAAAACAATTACAACCTCCAGCATTGACTAACGGTGACAGTAGTCCGTGTCCATTGACGAGTCCTTCATCATCAAGGTGGCCAAAAGCTGAAGTACATGCTTTGATAAGGCTTAGAACGAGCATGGAACCGAAGTATCAGGAGAATGGACCAAAAGCTCCGTTATGGGAGGACATATCAGCGGGGATGCAGAGGCTAGGGTACAACAGAAGCGCCAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAAGAGAGCAAGAAGCAAAGGCGAGAAGATAGCAAGACTTGTCCCTATTTTCATGAACTCGATGCTCTCTACAGAGAAAAAAGCAAAGGCCACAACACCAACACTTTCTCCTTTCACATCACGAATAAGACCAATGAGATGATGATGGAGCCGTTGATGGTGCAACCCGAGCAGCAATGGAGGCCTCCCCCTCAGCAGCAGCAGGATAAGGATGTGGATAAGAGTAATAATGCATGCCATGAAGATGATGAATCTAGAAAGAGAGAGAGAGAATATGATCATGAAGAAGAAGAGGAGGATGATGATGATGATGAAGTAGTAGATGACGATGATGATGGTGATGGAGATAGTGTGGAAGATGAAGGAGGTAACCGTTATGAGATTGCGACAAATAAACTTTCTTCAGTGGACGCGGTTGAATGA 1809 0.471 MQLGDPTVLETSTGEAAAAEGGGEAIGGDEGEKMNFGGGNRWPRQETLALLKIRSDMDSVFRDSSLKGPLWEEVSRKLGELGYHRSAKKCKEKFENVYKYHKRTKENRSGKSEGKTKTYKFFDQLQALENHQFTLSYNPTPKPQPPPTLPTNTLPLLPTSSSDATTTTTTVPSTNPTPPPTTTTTVVTNPNNPSSQQNINNINNTDSRVQHSLPIMNNLFSSTSTSSSTASDEDLEEKYRNKRKWKEYFRRLTRQVLAKQEEMQKRFLEAIDKREREQVAQQDAWRMQEMTRINREHDILVQERSTAAAKDAAVIAFLQKLSGQQQTPPPQPPITVSFGANFFQQPTPTPTPTPTPVQVQPPPQPQPQPQPQPQKQLQPPALTNGDSSPCPLTSPSSSRWPKAEVHALIRLRTSMEPKYQENGPKAPLWEDISAGMQRLGYNRSAKRCKEKWENINKYFKKVKESKKQRREDSKTCPYFHELDALYREKSKGHNTNTFSFHITNKTNEMMMEPLMVQPEQQWRPPPQQQQDKDVDKSNNACHEDDESRKREREYDHEEEEEDDDDDEVVDDDDDGDGDSVEDEGGNRYEIATNKLSSVDAVE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03058 602 MobiDBLite consensus disorder prediction 377 400 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 1 40 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 135 202 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 519 602 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 556 580 - -
Adu09g03058 602 CDD GT1 398 463 - -
Adu09g03058 602 CDD GT1 40 105 - -
Adu09g03058 602 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 23 590 - -
Adu09g03058 602 Pfam Myb/SANT-like DNA-binding domain 40 128 IPR044822 -
Adu09g03058 602 Pfam Myb/SANT-like DNA-binding domain 398 485 IPR044822 -
Adu09g03058 602 PANTHER - 23 590 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 323 401 - -
Adu09g03058 602 SMART sant 38 100 IPR001005 -
Adu09g03058 602 SMART sant 396 458 IPR001005 -
Adu09g03058 602 MobiDBLite consensus disorder prediction 347 376 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 219 238 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 154 172 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 535 555 - -
Adu09g03058 602 MobiDBLite consensus disorder prediction 180 202 - -
Adu09g03058 602 ProSiteProfiles Myb-like domain profile. 398 456 IPR001005 -
Adu09g03058 602 MobiDBLite consensus disorder prediction 139 153 - -
Adu09g03058 602 Gene3D - 400 461 - -
Adu09g03058 602 Gene3D - 42 103 - -
Adu09g03058 602 ProSiteProfiles Myb-like domain profile. 40 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03058 Adu-Chr9 118307253 118310499 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03058 37 536 Trihelix Transcription Factor Family AT1G76890 46.442 1.26e-136 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu09g03058 Myb_DNA-bind_4 6.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03058 - - gmx:100799041 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03493 05 107483811 107489613 Adu09g03058 09 118307253 118310499 PCT