Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03056 ATGCCTCCTCCTCCGCCTCCGCCTCCGCCGCCACCACCACCACCACCAACAACAACAACACATGTCACTGTTCCATCAACAACAATTATCCCTTCCTACCAAACAACACCACCACCACAACCAACAAACCCTACTACCTTACTATTCCCTTCTTCATCAACGACCACCATCCCGACCGATCTCCTCTCCAACTCCACCTCTTCCTCCACTTCCTCCGACGAATCAATGGATGGAAGGCGGAGGAGGAAGCGCAAGTGGAAGGACTTCTTCCACAGGCTAATGACGGAGGTCATCGAGAAGCAGGAGGATCTTCAGAAGAGGTTCCTCGAAGCCGTGGAGAAGCGAGAGCGTGATCGCATGGCCAGGGAGGAATCTTGGAGGCTACAAGAGATGCAAAGGATTAATAGAGAGAGGGAGATTCTCGCTCAGGAACGCTCCATTGCCGCCGCCAAAGACGCCGCCGTCATGTCATTCTTGCAGAAGATAGCCGAACAGCACAATCTAGGACAAGCATTGAATAATACGATCAGCATTGTGCAACCACAGCCACAACCACAACCACAACCGCAACCGCAATCACAACCAAATGCACCACAGATTCCGCCAGTACCGGTGCAACAACCTATCCCAGTAACGCAGGTTGCTGTTGCACCGGTTGCCGCTCAGCCTGTGGCACCGTCAGCACCGACGGTACCGCAGCAGCAACAAGTAGTGACAAGTATGGAAATCGTGAAAAGTGCTGACAATAACAATGGCGAGAAGTTGATCGGCGGAAGCTCGTCGAGGTGGCCGAAGGTGGAGGTCGAAGCGTTGATACGGCTGAGGACAAGCATGGACGCCAAGTACCAAGAAAACGGGCCAAAGGGGCCGTTATGGGAAGAGATCTCATCATCAATGAAGAAGCTCGGGTACAACAGAAACGCTAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAATACTTCAAGAAAGTCAAAGAAAGCAACAAGAAGAGGCCAGAAGATTCCAAGACTTGTCCCTACTTTCACCAGCTCGACGCTCTCTACAGGGAGAAGAACAAGCTGGATATGGCGCCGAAGCCGCAGAGCATGGTGGCGCCGCTGATGGTGAGGCCGGAACAGCAGTGGCCTCCTCAGGCCATGGAAGACGCAGAGAATGACCCCATGGAGCGGCACCATGACGAGGATGACGAGGACGAGGAGCAGGAGAAGGAGACTGGAGACGAAGAGGATGAAGAGGATGAAGGTGGTGGGAATGGCAATGGCGGTAATAACTATGAGATAGTGGGAAGCAAGGCTGCAACAGCTTCAGCTGAGTAG 1320 0.5318 MPPPPPPPPPPPPPPPTTTTHVTVPSTTIIPSYQTTPPPQPTNPTTLLFPSSSTTTIPTDLLSNSTSSSTSSDESMDGRRRRKRKWKDFFHRLMTEVIEKQEDLQKRFLEAVEKRERDRMAREESWRLQEMQRINREREILAQERSIAAAKDAAVMSFLQKIAEQHNLGQALNNTISIVQPQPQPQPQPQPQSQPNAPQIPPVPVQQPIPVTQVAVAPVAAQPVAPSAPTVPQQQQVVTSMEIVKSADNNNGEKLIGGSSSRWPKVEVEALIRLRTSMDAKYQENGPKGPLWEEISSSMKKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKLDMAPKPQSMVAPLMVRPEQQWPPQAMEDAENDPMERHHDEDDEDEEQEKETGDEEDEEDEGGGNGNGGNNYEIVGSKAATASAE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03056 439 CDD GT1 261 326 - -
Adu09g03056 439 ProSiteProfiles Myb-like domain profile. 261 319 IPR001005 -
Adu09g03056 439 MobiDBLite consensus disorder prediction 424 439 - -
Adu09g03056 439 MobiDBLite consensus disorder prediction 1 20 - -
Adu09g03056 439 MobiDBLite consensus disorder prediction 46 73 - -
Adu09g03056 439 MobiDBLite consensus disorder prediction 179 205 - -
Adu09g03056 439 Gene3D - 263 324 - -
Adu09g03056 439 MobiDBLite consensus disorder prediction 392 417 - -
Adu09g03056 439 MobiDBLite consensus disorder prediction 182 205 - -
Adu09g03056 439 MobiDBLite consensus disorder prediction 1 83 - -
Adu09g03056 439 SMART sant 259 321 IPR001005 -
Adu09g03056 439 MobiDBLite consensus disorder prediction 368 439 - -
Adu09g03056 439 PANTHER - 21 434 - -
Adu09g03056 439 SUPERFAMILY Formin homology 2 domain (FH2 domain) 5 295 - -
Adu09g03056 439 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 21 434 - -
Adu09g03056 439 Pfam Myb/SANT-like DNA-binding domain 261 348 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03056 Adu-Chr9 118278334 118279653 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03056 14 376 Trihelix Transcription Factor Family AT1G76880 51.436 4.63e-100 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu09g03056 Myb_DNA-bind_4 4.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03056 - - ahf:112712434 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03492 05 107468721 107471978 Adu09g03056 09 118278334 118279653 PCT