Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03054 ATGGAAGGAAATTTGTCACAGGGAGGTTTGATGCAAGGTGGGGCTTCTTTTGGTGGTTTTGATTTGCCCGGTTCGATTCGGGTTCATCACCAGGGACAGCATCCTCATACCATGCATCAACAACATCAAAATCTTCCGCGGCAAGGGTCCTCGGTTCATGAGGGTTTTCCACTTACAATGGGGAACTTACAGGGCTGTGATCAAACCATTTCGCTGACAGACTTTGCTAAGGGAGAAAGAAGCAAAAACTCGGCAAGCGAGGAAGATGAGCCGAGCTTTAATGAAGAAGGTGGTGATGGTCACCATGAAGCTGGTAGAGGGAAAAAGGGATCGCCTTGGCAGCGAGTGAAGTGGACTGATAAGATGGTAAGGCTTCTCATAACAGCTGTTTCTTACATAGGAGAGGATGGAAGTTCGGACGGCGGTGGTGGAGGAAGAAGGAGATTTGCCGTCCTACAGAAGAAAGGTAAGTGGAAGTCTGTTTCTAAGGTCATGGCCGAAAGGGGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAGTTTAATGATCTTAATAAAAGGTATAAGAAGCTTAATGATATGCTTGGAAGGGGCACTTCTTGTCAGGTTGTTGAGAATCCCACACTTTTGGATGTAATAGATTATCTTTCTGAGAAGGAAAAGGATGATGTTCGGAAAATATTAAGCTCGAAACACCTCTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGGCTGCATTTACCCCATGATCCTGCGCTGCAGCGTTCACTGCAGTTAGCACTTCGAAATAGGGATGATCATGATAATGATGATTTGAGAAAGTCCCATCATGATGATCATGACGAAGATGATCAAGATGCCGAATTCGATGATCATGATGACTTCGAAGAGAACTATACTTCCCATGGAGATAGTAGAGGAGCATACGGGTCTATGAAGAAATTGAAACAAGGACACTGCCAAGAAGATTCTACTAGTTTTGGTAACTCTTTAAATTGTCAGCACTACAGCAAAAGTTCTTATCCCCATGGACAGATGGTCCAATCCGATGTGAATCAAGGTTTACCCGAAAGCGTGCGAACAGCTTGGTTTCAAAAGCAATGGTTTGAATCTCGCTCGCTTCAGCTTGAGGAACAAAAGCTACAGATACAGGTTGAGATGTTGGAACTAGAGAAACAGAGATTAAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCGGGAGTTGGAGAAACTGAGTCTGGAAAATGAAAGGATGAAGCTTGAGAACGAACGCATCGCTTTAGAACTGAAACGGAAGGAAATCGGCGCTGGCTTTAACTAG 1326 0.4397 MEGNLSQGGLMQGGASFGGFDLPGSIRVHHQGQHPHTMHQQHQNLPRQGSSVHEGFPLTMGNLQGCDQTISLTDFAKGERSKNSASEEDEPSFNEEGGDGHHEAGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGSSDGGGGGRRRFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPTLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDLRKSHHDDHDEDDQDAEFDDHDDFEENYTSHGDSRGAYGSMKKLKQGHCQEDSTSFGNSLNCQHYSKSSYPHGQMVQSDVNQGLPESVRTAWFQKQWFESRSLQLEEQKLQIQVEMLELEKQRLKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEIGAGFN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03054 441 PANTHER FACTOR, PUTATIVE-RELATED 1 441 - -
Adu09g03054 441 MobiDBLite consensus disorder prediction 76 113 - -
Adu09g03054 441 MobiDBLite consensus disorder prediction 80 113 - -
Adu09g03054 441 MobiDBLite consensus disorder prediction 16 60 - -
Adu09g03054 441 MobiDBLite consensus disorder prediction 268 284 - -
Adu09g03054 441 PANTHER F16F4.11 PROTEIN-RELATED 1 441 - -
Adu09g03054 441 MobiDBLite consensus disorder prediction 268 312 - -
Adu09g03054 441 Gene3D - 118 190 - -
Adu09g03054 441 Pfam Myb/SANT-like DNA-binding domain 115 241 IPR044822 -
Adu09g03054 441 Coils Coil 403 435 - -
Adu09g03054 441 Coils Coil 373 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03054 Adu-Chr9 118248966 118251395 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu09g03054 Myb_DNA-bind_4 4.4e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03054 - - pvu:PHAVU_007G079600g 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03491 05 107450301 107452285 Adu09g03054 09 118248966 118251395 PCT