Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03052 ATGGGTAGGAAGAAGCCTACGGCACGCGACGACGATAACGTGCCTGCTGCATCACAGGGAGGCGGCAAATCGAAGAAGAAGGTCGTTGTCGACGATAATGAGTATGACATCGGTGACCTCTCCGAGGAGCCGCAGCCTGTGGCATCACCAGCTGCCAAGAAGAAGGGCAAAAAGGATAATGCCAAAGCTAAGGCAAAGGGTAAGGACGTCGAAGATGATGACGATGATGTGGCAATTAGTGCGGCTGGGGACGATGATGAGGATGAGGATGCTGGGATTGTGTTTGCTGGGAAGAAGAAGAAGGGTAAATCTAAGAAAGGTGGTGGAGGCAGTGTGTTCGCTGCTGCATCTGGTTTTGGCTTGCTTGGTGATGATGACGGTGATGGTGGTGATGATGAAGACGATGACAAATCTGGGATAACTGGTGAGGGTGGTGACGCTGAGGAGGAGGAGGACGAGGAGGCTGTGGTTAGTTTTACAGGGAAGAAGAAGCCTTCTAAGGGCTCGAAAAAAGGTGGTGGCAGTGTGTTCAGTGCCTCAGCTTTTGATGCTATTGATGATGGTGATAATGACGGTGGGGAGGAGGATGAGCTGGTGATTAGTTTTTCGGGTAAGAAGAAGCCATCGAAGGGATCGAAGAAAGGCAGTTCATTCTCTGCCTCGGCCTTTGATGATGGTGAGGAGGTGGTGGATAGTGGTGGAGGTGAGGATGAACCAGCTATTGCTTTTACTGGGAAGAAGAAGTCTTCTAAAGGTGGCAGGAAGGGTGGTGTTGCTGCATTTTCAGCAGCTAGTTTTGGTGATATTGACGATGGGGAGGAGGCTAAGAATGAAAAGGAGGAAGATGAGGATGGTGAGGACATGCCAATTACCTTCTCTGGTAAGAAAAAGAAGTCATCAAAGTCTACGAAGAAGGCTTCATTTAGTTCAGCTTTTGCCGATGAAGAAGATGATTCTGTAGCTGAGCCTACTAGAGACGGTGAGGATGAAGATGATGTTTTGGTTGCGTTTTCGGGTAAGAAGAAGTCTTCTAAAAAGAAAACTAGTGCCAAACCATGTGATGAAACTGTTGAGCCTGAGCAACCTAGTGTTGGAGTTAGTAGTGCAGATGTTGACAACAATGTAAATAAGAGTGGAGTCACTGAAACCTCCAAAAATAAGAAGAAGAAGAAAAACAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTAGATGCGATTCTCGCGGAGCTTGGTGAGGGCCCTCCAATAGCTAAACCTTCTGCTCCTCAATCCCAGGATGATAAAGCTCAGCAGGATGATAAGGCTCAGCCTGCTTCGGAATCAGGACCTGCTACTGATGCTGCGGGTGAAAAGGAGGGGGAAGAGGAGACAGTAGAATCAGCTGCTGCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCGGCAGCAGCAGCAGCAGCAGCTGCTGGAACTGCAGTAGAAAATGAAGCTAAAGAAGTTAAGGCCGAGCCTGCTGAAGCTAAGAAGAATGATTCAAAGGCCAAAGCAGTCGACAACAAGAAAATACCCAAGCATGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGGAAGGAGGCTGAAGAAAGGCAGAAGAAAGAATTGGAGGAGAGGTTAAGGAAGGAAGAAGAGGAGCGACGTAGGCAGGAGGAACTTGAGAGACAGGCTGAAGAAGCTAGACGCAGGAAGAAGGAGAAAGAAAAGGAGAAGCTCCAGAGAAAGAAGCAAGAAGGTAAACTGCTAACTGGTAAGCAGAAAGAGGAGGCTCGCCGCTTGGAGTTAATGAGGAAGCAGTTTCTTAATAGCACAGGAGGTGTGACTGTCCCTGGTGGGGACTCTGGTGCACCAGCCAAAAGGCCTATATATCAGACAAAGAAGTCGAAACCAACCCATCATCAGCAGAATGGTGCTGCTGCCCCCGCCACCGCTGCCGTTGAGACGGCTGAAAGCCTTGAAGCAAAGGAAGAGACAGCCACTGATGCAGGTTCAGACGAACCAGAAAAGGTTGAAGAAACCGTGGTAGAGCAGGTGGAGGAGAAAGTTGAACCTCTGGAAGCTGCTGAAGACAATGGAGTAGATGATGATGAAGAAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAGGGTGCATTTGCTGATGAAGATTCTGAGCTTGTACCAGTTGCCAAAAAGGAGACAAAGACTGCTGTAACTATGAACAATGCTGCTGCAACAAAGAAAACAATTTCTAATCCTGTGACCGAAGAAATTATAGATAGAAAGCTTGTTGCTGACAAGAATAACTCAGAACCACCAAAATCTGTTTTGCCAAGGGAACCTACAAAGCTTACTCAGTCAAAAGAAACGCAAAAGTCCTCTGTGTCTCCTAAGCCGAGTGGAGAGAACCTCCGTTCTCCAATTTGCTGTATCATGGGGCATGTGGATACTGGTAAAACTAAGCTGCTGGATTGCATTCGAGGTACTAATGTTCAAGAGGGTGAGGCCGGTGGTATCACACAGCAGATTGGTGCAACATACTTCCCTGCGGACAACATACGTGAAAGAACTAAGGAGTTGAAAGCTGATGCAAAACTAAAAGTTCCTGGTCTACTGGTTATTGATACGCCAGGGCACGAATCATTTACCAACTTAAGGTCTCGGGGTTCAGGGCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGCTTAGAGCAACAGACAATTGAATCACTCAATCTATTAAAAATGAGGAATACAGAATTCATTGTGGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGCAATGCTCCAATTATCAAAGCGATGAAACAACAAACCAAGGATGTTCAAAATGAGTTCAATCACAGGCTCGTCCAGATTATTACTCAATTGAAGGAACAGGGACTAAATACCGAGTTGTATTATAAAAACAAGGAAATGGGAGAAACATTCAACATTGTACCTACAAGTGCAATAAGTGGTGAAGGAATCCCTGATTTGTTGTTACTGTTGGTTCAATGGACCCAAAAAACAATGGCTGAGAAACTTACTTATAGTGATGAAGTGCAGTGCACTGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGACCAAATAGTTGTCTGTGGAATGCAGGGGCCAATTGTAACAACAATTCGAGCTTTACTCACACCGCATCCAATGAAGGAACTCCGTGTTAAGGGTACATTTCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAACTGGTTTATATGTTGTGAAGCCTGATGATGATTTGGATGATATTAAAGAATCTGCAATGGAAGATATGCGATCAGTCATGAGCAGGATTGACAGGAGCGGTGAGGGAGTTTGTGTACAGGCATCTACCCTTGGTTCTTTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTGAATATTCCCGTTAGTGGTATAAGCATTGGCCCTGTGCATAAAAAGGATGTTATGAAGGCAAGCGTAATGCTTGAAAAGAAACGAGAATATGCCGCTATATTGGCATTTGATGTCAAAGTCACTCCCGAGGCTAGGGACCTTGCAGAAGAACTGGGTGTGAAAATTTTTATCGCTGATATCATTTATCATTTGTTTGATCAATTTAAGGCCTATATCGATAACATTAAGGAGGAGAAAAAGAAGGAATCTGCCGATGAGGCAGTCTTCCCATGTGTTCTGAAAATTTTACCAAACTGTGTTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATGTTCTTGAAGGCATTGCGAGGATTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGATATTGGCCGCATTGCCTCCATTGAAAATAACCACAAGCCAGTTGATTATGCAAAGAAGGGGCTGAAAGTAGCTATTAAGATTGTTGGTAGCAATCCTGAGGAGCAACAGAAAATGTTTGGGAGGCATTTTGAGATAGATGACGAACTTGTAAGCCATATTTCGCGGAGGTCTATCGACATACTCAAAGCTAATTATCGGGATGATCTAAGCACTGAAGAATGGAGGCTTGTTGTGAAATTAAAGAATGTTTTCAAGATTCAATGA 4215 0.446 MGRKKPTARDDDNVPAASQGGGKSKKKVVVDDNEYDIGDLSEEPQPVASPAAKKKGKKDNAKAKAKGKDVEDDDDDVAISAAGDDDEDEDAGIVFAGKKKKGKSKKGGGGSVFAAASGFGLLGDDDGDGGDDEDDDKSGITGEGGDAEEEEDEEAVVSFTGKKKPSKGSKKGGGSVFSASAFDAIDDGDNDGGEEDELVISFSGKKKPSKGSKKGSSFSASAFDDGEEVVDSGGGEDEPAIAFTGKKKSSKGGRKGGVAAFSAASFGDIDDGEEAKNEKEEDEDGEDMPITFSGKKKKSSKSTKKASFSSAFADEEDDSVAEPTRDGEDEDDVLVAFSGKKKSSKKKTSAKPCDETVEPEQPSVGVSSADVDNNVNKSGVTETSKNKKKKKNKSGRTAQEEEDLDAILAELGEGPPIAKPSAPQSQDDKAQQDDKAQPASESGPATDAAGEKEGEEETVESAAAKKKKKKKEKEKEKKAAAAAAAAAGTAVENEAKEVKAEPAEAKKNDSKAKAVDNKKIPKHVREMQEALARRKEAEERQKKELEERLRKEEEERRRQEELERQAEEARRRKKEKEKEKLQRKKQEGKLLTGKQKEEARRLELMRKQFLNSTGGVTVPGGDSGAPAKRPIYQTKKSKPTHHQQNGAAAPATAAVETAESLEAKEETATDAGSDEPEKVEETVVEQVEEKVEPLEAAEDNGVDDDEEEDEWDAKSWDDVNLNAKGAFADEDSELVPVAKKETKTAVTMNNAAATKKTISNPVTEEIIDRKLVADKNNSEPPKSVLPREPTKLTQSKETQKSSVSPKPSGENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPADNIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIIKAMKQQTKDVQNEFNHRLVQIITQLKEQGLNTELYYKNKEMGETFNIVPTSAISGEGIPDLLLLLVQWTQKTMAEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTFLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLDDIKESAMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYAAILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDVLEGIARIGTPICIPSRDFIDIGRIASIENNHKPVDYAKKGLKVAIKIVGSNPEEQQKMFGRHFEIDDELVSHISRRSIDILKANYRDDLSTEEWRLVVKLKNVFKIQ 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03052 1404 MobiDBLite consensus disorder prediction 52 73 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 116 718 - -
Adu09g03052 1404 TIGRFAM small_GTP: small GTP-binding protein domain 817 970 IPR005225 GO:0005525
Adu09g03052 1404 MobiDBLite consensus disorder prediction 361 381 - -
Adu09g03052 1404 Coils Coil 520 591 - -
Adu09g03052 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 813 1103 IPR027417 -
Adu09g03052 1404 CDD aeIF5B_II 1036 1146 - -
Adu09g03052 1404 Gene3D Translation factors 1267 1404 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 494 605 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 1 90 - -
Adu09g03052 1404 Gene3D - 807 1034 IPR027417 -
Adu09g03052 1404 CDD IF2_aeIF5B_IV 1275 1370 - -
Adu09g03052 1404 CDD IF2_eIF5B 815 1025 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 698 714 - -
Adu09g03052 1404 Gene3D Translation factors 1035 1155 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 448 467 - -
Adu09g03052 1404 PRINTS GTP-binding elongation factor signature 816 829 IPR000795 GO:0003924|GO:0005525
Adu09g03052 1404 PRINTS GTP-binding elongation factor signature 880 890 IPR000795 GO:0003924|GO:0005525
Adu09g03052 1404 PRINTS GTP-binding elongation factor signature 896 907 IPR000795 GO:0003924|GO:0005525
Adu09g03052 1404 PRINTS GTP-binding elongation factor signature 932 941 IPR000795 GO:0003924|GO:0005525
Adu09g03052 1404 MobiDBLite consensus disorder prediction 788 809 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 659 697 - -
Adu09g03052 1404 Pfam Translation-initiation factor 2 1141 1253 IPR023115 -
Adu09g03052 1404 Gene3D - 1156 1260 IPR036925 -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 315 329 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 769 811 - -
Adu09g03052 1404 SUPERFAMILY Translation proteins 1271 1403 IPR009000 -
Adu09g03052 1404 Pfam Elongation factor Tu domain 2 1051 1126 IPR004161 GO:0005525
Adu09g03052 1404 MobiDBLite consensus disorder prediction 74 90 - -
Adu09g03052 1404 MobiDBLite consensus disorder prediction 125 155 - -
Adu09g03052 1404 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1404 IPR015760 -
Adu09g03052 1404 Coils Coil 452 484 - -
Adu09g03052 1404 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 812 1028 IPR000795 GO:0003924|GO:0005525
Adu09g03052 1404 Pfam Elongation factor Tu GTP binding domain 816 1024 IPR000795 GO:0003924|GO:0005525
Adu09g03052 1404 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1404 - -
Adu09g03052 1404 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1137 1266 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03052 Adu-Chr9 118227383 118235064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03052 233 1404 Eukaryotic Initiation Factors Gene Family AT1G76810 65.433 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03052 K03243 - gmx:100814875 1531.15