Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03015 ATGTACCAGCCTTCCTCTTCCTCCTCCTCTTCTTCTCAGGCACACAACTCAACCGTTTCTGAACCAGCTTTGACCCGCTACGGTTCAGCCCCTGGCTCTCTCCTCCGCACAGCCGTCGATGCTGTCATAGCCGGAGGGGCTGGAGGCCCCCGACATCCTCATCCTCTCATGCCTACGGGATCCCACTACTTCTCCGGGGAGTCCTCCGAGTCCACCTCCAAAATATCAGAGGTAAGCGAGAGTGTTGTGGTGGATGCATCCACTTCTGAGCGTGCTTATGCAATGGACCACTGCTGGGACAACTCTAACTCCAACTCCAGCTCCATTGTCTTCTCCGCCCCGCCCTCCAAACGCTCCAAAAATATTGACGGTGACATCCTAAATTGTCTCACTGCCTTAGACTCTCAGTATAGTCTGCCACAAACTGCTCTTGAAATGGCAACAATGGAGAAGCTAATGCACATTCCTGAAGACTCTGTCCCTTGTAAAATCCGTGCTAAGCGAGGCTGTGCCACTCACCCTCGCAGCATTGCAGAACGGGAGAGAAGAACTAGAATAAGCGGTAAGCTGAAGAAACTGCAGGAACTTGTACCCAATATGGATAAGCAAACAAGCTATGCAGACATGCTAGATTTGGCAGTTCAACATATTAAAGGTCTTCAAACTCAAGTCCAGGAGACGTTGAGTGAGCGACGCCGGGAGGTGCTGCAGAGGCAGAACAGAATTCCAGCCATCGTTACTCTTCTGCGTCCGACGACGACGATGATGATGACGACGACGACGAAGACATTGAAAGGTGCGAGCAAGATGAGAGGCTTGAGCCTCCTCTTAGGACTCTGCAACTTCTTTATCCTCCTCATTGGTGCCTACCTCATCTTCCAAATCCACTCCCTCTGCCGCCCCCGTTTCCTCCCTCCTTTCGCCATCGTCTCCATCGCCGCCCTCCTCCGCCTCTTACTCATGCTCCGCACCGCCCTCGCCCAACAGGTCGCCGCGCAATTCATCCTCAACTCCCCCTCCGACGCCTCCACCGACTCTCTTCTCCGCCTCCATCGCCGCGAAAAGTACAAGAAATGGCTTTGGTGGAGTCGCTGCACATCCGTCTTCACCGTGATTCAGTTCGTCTGCGCCGGTTACCTCTTAATCAAGTCTCCTGCCTATTTATCCACCGATTCTGCTTGTCCTTTAGCGATGGAATGGAAATCGCAGTTGTGGAAGCAGAGGCTGCTCTCTTTCTTCATGATCATGGTGAGTTTTGTCGCCGTACTGCAGTGTTTTGCAGGATCTGATGTTCTCAGATGGAGATCTTTCTATGAATCACAAGATGATGCTTGGAAATGCCATTATAGGGAGGTATTCGACAATGGCATTCGCGAAACCTTGTGTTGTCTCGGCCGGGTTAAATACTTGAGTGCATTGGAAGAGGATGAGGTCTATTCAGTGGCACGATTACTAGGCGATCTTGTTGCTTATCGAGCTACGGGAACTGGCCATATGGAACTCTTGGCAGGTTTAACATTACTTCAAAGCCAAGAGAACTCTTCAGAATCCTATGAAGATGCCATAGAACCACCAGAGGCGAAAATGAGGGAGGCTGCGGCTCTTCATAAATTTGCTGAAGCTGCATATACAGGTCCATTGCTTGATTTGGGACGAAATCCTTTCCTATTTCCATGTGCATGGCTCTATAGACAAGGGATTTTATCTCCTTGGTCACGCAATAGCCGACCCGTATTGGAGGGCGATAACTGGTGGCGAGGTCATGCAGCAGCATTTTTAAAGTATGTTAATTTGCCTCCAGAAGTGCTCAGACAAGGGCGAGTCAGCCAGTTCAAGTGTCAAGCTGCATACTTTATTGTGGTTCTGCATCATCTGAGGACTGTAGTAATTACTATACGTGGAACTGAAACTCCTGAGGACCTAATAACTGATGGGTTATGCAAGGAATGCACCCTTTCTACAAAAGACTTGGCTGGTTTGACTAACTGCAGCCACATTCCTTCCAATATAAAGAAAATTGTTACTTCATCTTTCCCACATCATGCACATTCTGGTATAGTGGAGGCTGCACGTGAGCTTTTTATGCAGATTGAAGGAAATGCTGATATACACAGCACTGAATCTTATGGGCTTCTTTCTCAATTACTTGGAGTTGGTTGTGAGTGCTATGGGTATAACATTCGCATAGTTGGGCATTCGCTTGGGGGCGCTATAGCAGCATTACTTGGATTGCAAGTATAG 2241 0.4913 MYQPSSSSSSSSQAHNSTVSEPALTRYGSAPGSLLRTAVDAVIAGGAGGPRHPHPLMPTGSHYFSGESSESTSKISEVSESVVVDASTSERAYAMDHCWDNSNSNSSSIVFSAPPSKRSKNIDGDILNCLTALDSQYSLPQTALEMATMEKLMHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQTQVQETLSERRREVLQRQNRIPAIVTLLRPTTTMMMTTTTKTLKGASKMRGLSLLLGLCNFFILLIGAYLIFQIHSLCRPRFLPPFAIVSIAALLRLLLMLRTALAQQVAAQFILNSPSDASTDSLLRLHRREKYKKWLWWSRCTSVFTVIQFVCAGYLLIKSPAYLSTDSACPLAMEWKSQLWKQRLLSFFMIMVSFVAVLQCFAGSDVLRWRSFYESQDDAWKCHYREVFDNGIRETLCCLGRVKYLSALEEDEVYSVARLLGDLVAYRATGTGHMELLAGLTLLQSQENSSESYEDAIEPPEAKMREAAALHKFAEAAYTGPLLDLGRNPFLFPCAWLYRQGILSPWSRNSRPVLEGDNWWRGHAAAFLKYVNLPPEVLRQGRVSQFKCQAAYFIVVLHHLRTVVITIRGTETPEDLITDGLCKECTLSTKDLAGLTNCSHIPSNIKKIVTSSFPHHAHSGIVEAARELFMQIEGNADIHSTESYGLLSQLLGVGCECYGYNIRIVGHSLGGAIAALLGLQV 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03015 746 Gene3D alpha/beta hydrolase 590 746 IPR029058 -
Adu09g03015 746 SMART finulus 176 226 IPR011598 GO:0046983
Adu09g03015 746 Gene3D - 167 233 IPR036638 GO:0046983
Adu09g03015 746 MobiDBLite consensus disorder prediction 1 25 - -
Adu09g03015 746 CDD bHLH_AtbHLH_like 175 226 IPR045239 -
Adu09g03015 746 SUPERFAMILY alpha/beta-Hydrolases 594 745 IPR029058 -
Adu09g03015 746 MobiDBLite consensus disorder prediction 1 24 - -
Adu09g03015 746 MobiDBLite consensus disorder prediction 62 78 - -
Adu09g03015 746 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 220 IPR011598 GO:0046983
Adu09g03015 746 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 231 IPR036638 GO:0046983
Adu09g03015 746 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 267 745 - -
Adu09g03015 746 Pfam Helix-loop-helix DNA-binding domain 175 221 IPR011598 GO:0046983
Adu09g03015 746 CDD Lipase_3 583 744 - -
Adu09g03015 746 MobiDBLite consensus disorder prediction 45 78 - -
Adu09g03015 746 Pfam Lipase (class 3) 629 745 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03015 Adu-Chr9 117770204 117779241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03015 99 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43140 75.000 8.23e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu09g03015 Lipase_3 1.1e-06 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03015 - - adu:107467700 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03015 09 117770204 117779241 Adu09g03015 09 117770204 117779241 ECH
Adu06g00947 06 11739673 11743472 Adu09g03015 09 117770204 117779241 ECH
Adu02g01573 02 67106359 67109529 Adu09g03015 09 117770204 117779241 ECH