Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02927 ATGGTGGTGAAGATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGGTGTTTGTGAAGGTTATGACTGATGAACAGTTAGAGACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGCGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTGCAGGAGTTCGGGTGGGGAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAAAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGTATATTTGATCAAGGGAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATTACTTCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACATACTACTATTGAACCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGATTCCCAACAACAACAACATAGTACCATCATGATGACCAATGCTTCTGCTGCTAATCGGTCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTGAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGTATAATTTATATCAGCAAGGAGGAGACTACAACTTGGGGGGTTGA 855 0.4094 MVVKMIEWQKQLQNNEKADRTNNNMVFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLAGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITSELSHHGQISETNVYNWFQNRRARSKRKLQNNVPHTTIEPEVDAEVDSKDKKTRPEELIDSQQQQHSTIMMTNASAANRSEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMYNLYQQGGDYNLGG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02927 284 MobiDBLite consensus disorder prediction 149 190 - -
Adu09g02927 284 CDD homeodomain 90 151 IPR001356 GO:0003677
Adu09g02927 284 Pfam Homeodomain 90 150 IPR001356 GO:0003677
Adu09g02927 284 ProSiteProfiles 'Homeobox' domain profile. 86 151 IPR001356 GO:0003677
Adu09g02927 284 MobiDBLite consensus disorder prediction 163 182 - -
Adu09g02927 284 SUPERFAMILY Homeodomain-like 88 153 IPR009057 -
Adu09g02927 284 Gene3D - 91 158 - -
Adu09g02927 284 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 282 IPR044559 GO:0003700
Adu09g02927 284 PANTHER - 5 282 - -
Adu09g02927 284 SMART HOX_1 88 155 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02927 Adu-Chr9 116874043 116876528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02927 5 284 Wox Gene Family AT4G35550 47.315 5.72e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu09g02927 Homeodomain 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02927 - - ahf:112777216 561.607