Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02923 ATGTCCAAGGAGATTCAATTTCCGGAAATTTCTTCTCTGCCTGTGGCCAGGTTCCAGGATTTGCAGTGTCTAAGAGAAGATGATGATGAGACTTGCTCCATTTGCTTGGTGGAGTTTGAAGATGAAGATGCTGTGAGTAAGCTTAGAAGGTGTAACCACATATTTCATCTTAGTTGCATTCAACAATGGATAGAGCGAAATCAATTCTCATGCCCACTTTGTAGGTCATTTTTATTTTCTCATAATCTTCATACCAAAGAATTCAATGAATACTAG 276 0.3841 MSKEIQFPEISSLPVARFQDLQCLREDDDETCSICLVEFEDEDAVSKLRRCNHIFHLSCIQQWIERNQFSCPLCRSFLFSHNLHTKEFNEY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02923 91 SUPERFAMILY RING/U-box 23 80 - -
Adu09g02923 91 Pfam Ring finger domain 31 75 IPR001841 -
Adu09g02923 91 SMART ring_2 32 74 IPR001841 -
Adu09g02923 91 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Adu09g02923 91 PANTHER RING ZINC FINGER PROTEIN-RELATED 5 79 - -
Adu09g02923 91 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 5 79 - -
Adu09g02923 91 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 79 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02923 Adu-Chr9 116851760 116852035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02923 25 89 C3H Transcription Factor Family AT4G38140 50.000 1.66e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02923 - - pvu:PHAVU_007G012000g 114.005