Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02916 ATGAAACCACGAACCAGTGAAAGTGAAGAAGAAAGTGGAAAATTGGGAGAGGGAAGCAGCACATCGCAGGGGCAGAGAGTCGACGCAGTTGAATCTCGATCCTCGTCGGTTATTGTTCGCGGCAGGGATGGCAGCGCTTTCGTCAAATGCCAAGACTGCAAAGAGGACGTTCCTGTTGGACTTGTCAGCATGCATGGTTGCAGCGACGAAGCCAAAACTAAAATGAATCTCGAGACACAACTTGTGGAACGGCCTTATGAAGCTAAGAGACCAGTGAGGAAGAAGACAAGATCTGATGTACCAAAGGCTAAAAGGGCCAAAGTTGAGAAGACGAAGAAGGTGAAAGATCCACACGTGCCAAAGAAGCCTCCAGCAGCATCCTTCTTTCTCTTCATGGATGATTTTGAGAAATCTTTTAAGGAGGCAAATCCTGATTCAAAGGATGGTAACAGGGTTTTTAAAGAGGCTCGTGCCAAATGGAGGTCCATGACTGCTGAAGAGAAGAAGCCTTATTCTGATAAACTTGCTGAACTTAAAGCAGAATATGAGAAGGCTATGGAAATTTACAATGCTGCTGAAGCAGAAGGAGAAGAGGGAGAAGGTGAAGGAAAGCATGAAGAGGGGACTGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGAGGCTGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGGGGATGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGAGGAGCTGAATGATGAGGACTAA 789 0.4588 MKPRTSESEEESGKLGEGSSTSQGQRVDAVESRSSSVIVRGRDGSAFVKCQDCKEDVPVGLVSMHGCSDEAKTKMNLETQLVERPYEAKRPVRKKTRSDVPKAKRAKVEKTKKVKDPHVPKKPPAASFFLFMDDFEKSFKEANPDSKDGNRVFKEARAKWRSMTAEEKKPYSDKLAELKAEYEKAMEIYNAAEAEGEEGEGEGKHEEGTDEQSDKEEAAAGEEEADEQSDKEEAAAGEEGDDEQSDKEEAAAGEEEELNDED 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02916 262 MobiDBLite consensus disorder prediction 189 215 - -
Adu09g02916 262 Gene3D High mobility group box domain 102 202 IPR036910 -
Adu09g02916 262 Pfam HMG (high mobility group) box 122 190 IPR009071 -
Adu09g02916 262 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 121 190 IPR009071 -
Adu09g02916 262 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 23 214 - -
Adu09g02916 262 Coils Coil 175 195 - -
Adu09g02916 262 MobiDBLite consensus disorder prediction 102 120 - -
Adu09g02916 262 MobiDBLite consensus disorder prediction 84 125 - -
Adu09g02916 262 MobiDBLite consensus disorder prediction 1 36 - -
Adu09g02916 262 MobiDBLite consensus disorder prediction 216 262 - -
Adu09g02916 262 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 23 214 - -
Adu09g02916 262 SUPERFAMILY HMG-box 107 192 IPR036910 -
Adu09g02916 262 CDD HMGB-UBF_HMG-box 120 187 - -
Adu09g02916 262 SMART hmgende2 120 191 IPR009071 -
Adu09g02916 262 MobiDBLite consensus disorder prediction 15 32 - -
Adu09g02916 262 MobiDBLite consensus disorder prediction 189 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02916 Adu-Chr9 116800012 116801281 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Adu09g02916 HMG_box 2e-14 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02916 K25507 - aip:107619373 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02916 09 116800012 116801281 Adu09g02916 09 116800012 116801281 ECH