Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02915 ATGGCGAAGGGAAACAACACATCACAAGGGAGGAAGAGAGTGGACGCCGTTGATTCTCGATCTGCGTCGGTTCTTGTTCGCGCCAAGGATGGCAGCGCTTTCGCCAAATGCGATGAGTGCAAGAAGGATGTTCCTGTTGCACTCATCAGCATGCATAGTTGCAGCCTCGAAGCCAAAATCAAAATGAATCTCGAGGCACAAGTTGTGGAACAGGCTTCGGAAGTGAAGAAACCAGAGAGGAAGAAGCCGAAATCTAATGAACCAAAGGCTAAAAGAGCGAAAGTTGAGAAGACGAAGAAGGTGAAAGATCCAAATGCGCCAAAGCGTCCTCCCACAGCTTTCTTTCTCTTCATGGATGATTTTAGAAAATCTTTTAAGGAGGCAAATCCTGATTCAAAGGATGTTAAGAGGGTTAGTAAAGAGGCTGGTGAGAAATGGAGGTCCATGACTGATGAAGAGAAGAAGCCTTATTCCGATAAAGTTGTTGAGCTTAAAGCAGAATACGAGAAGGCTATGAAAAGTTATAATGATGCTGAAGTAGAAGGAGAAGAGGGAGAAGGAGAGCATGAAGAGGGGGCTGATGAAAAATCTGATAAGGAAGATGCTGCTGGTGAAGACGAGGAGTTGACTGATGAGGAGTAA 642 0.4517 MAKGNNTSQGRKRVDAVDSRSASVLVRAKDGSAFAKCDECKKDVPVALISMHSCSLEAKIKMNLEAQVVEQASEVKKPERKKPKSNEPKAKRAKVEKTKKVKDPNAPKRPPTAFFLFMDDFRKSFKEANPDSKDVKRVSKEAGEKWRSMTDEEKKPYSDKVVELKAEYEKAMKSYNDAEVEGEEGEGEHEEGADEKSDKEDAAGEDEELTDEE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02915 213 MobiDBLite consensus disorder prediction 127 157 - -
Adu09g02915 213 MobiDBLite consensus disorder prediction 70 112 - -
Adu09g02915 213 Gene3D High mobility group box domain 102 179 IPR036910 -
Adu09g02915 213 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 5 200 - -
Adu09g02915 213 MobiDBLite consensus disorder prediction 72 106 - -
Adu09g02915 213 CDD HMGB-UBF_HMG-box 107 173 - -
Adu09g02915 213 Pfam HMG (high mobility group) box 107 176 IPR009071 -
Adu09g02915 213 MobiDBLite consensus disorder prediction 173 213 - -
Adu09g02915 213 SUPERFAMILY HMG-box 98 177 IPR036910 -
Adu09g02915 213 MobiDBLite consensus disorder prediction 1 22 - -
Adu09g02915 213 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 107 176 IPR009071 -
Adu09g02915 213 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 5 200 - -
Adu09g02915 213 SMART hmgende2 106 177 IPR009071 -
Adu09g02915 213 Coils Coil 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02915 Adu-Chr9 116798212 116799720 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Adu09g02915 HMG_box 3.8e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02915 K25507 - gmx:100810345 304.293