Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02912 ATGGTCTTCGTTAGGAAATTCAACCTGAGCTTGACCGTCGGTACGCGGTCTCATCGGATGTTGGCATATGCTGCTGTTGGCACTGTGAATAAAAACTATGCAAATATTCTTTCAATGCTTTCCCGTCTTCGTCTAGCTTGTGATCACCCGCATCTTGTTAAAGGTGACTATTGTCATTCACTAGTGCAGCAGAGTGAGTACACCTCATCTAAAATCAAAGCTGTCCTTGAGATTCTGCATTCAAATTGTAAACTGAATAGTCCTAGCTCTGGTTTACTAAATTCTGCTGGAAGCCGTAGAGGTTCACCATCTTCTGATGATTCATATATTGAAGATTGCGACTCAGATGCCAGGATTATGAAACAAACAAGAAAATATTCAGAGTCAACAACTGTAGGACCAATAAAGGCTATAGTTTTTTCCCAATGGACTAGAATGTTGGACTTAGTTGAGGCATCATTGCAACAATCCCCTATACAATACAGGAGACTTGATGGGACGATGTCTCTGATTGCTAGAGACAGATCTGTTAAAGATTTTAATACTGATCCCAAGGTAACTGTTATGCTGATGTCGCTAAAAGCAGGAAATCTTGGATTGAATATGGTTGCTGCGTGTCATGTTATTCTTTTGGATCCGTGGTGGAATCCAACAACTGAAGATCAAGCTATTGATCGAGCTCATAGAATTGGACAGACTCGTCCTGTTACAGTGACACGGCTCACTATAAAAGATACAGTTGAAGACAGAATACTGGCTCTTCAGGAAGAGAAGAGGAAAATGGTTGTATGCACTTTTGGTGAAGACCATGCCGGCAGCTCTGAGACTCGCCTTTCAGTGGATGATCTGAAATATCTTTTCGGTGTAGATTCTTAG 876 0.4132 MVFVRKFNLSLTVGTRSHRMLAYAAVGTVNKNYANILSMLSRLRLACDHPHLVKGDYCHSLVQQSEYTSSKIKAVLEILHSNCKLNSPSSGLLNSAGSRRGSPSSDDSYIEDCDSDARIMKQTRKYSESTTVGPIKAIVFSQWTRMLDLVEASLQQSPIQYRRLDGTMSLIARDRSVKDFNTDPKVTVMLMSLKAGNLGLNMVAACHVILLDPWWNPTTEDQAIDRAHRIGQTRPVTVTRLTIKDTVEDRILALQEEKRKMVVCTFGEDHAGSSETRLSVDDLKYLFGVDS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02912 291 CDD SF2_C_SNF 136 241 - -
Adu09g02912 291 PANTHER HELICASE-LIKE TRANSCRIPTION FACTOR CHR28 6 65 - -
Adu09g02912 291 PANTHER HELICASE-LIKE TRANSCRIPTION FACTOR CHR28 60 287 - -
Adu09g02912 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 290 IPR027417 -
Adu09g02912 291 Pfam Helicase conserved C-terminal domain 135 231 IPR001650 -
Adu09g02912 291 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 6 65 - -
Adu09g02912 291 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 60 287 - -
Adu09g02912 291 Gene3D - 12 290 IPR027417 -
Adu09g02912 291 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 118 284 IPR001650 -
Adu09g02912 291 SMART helicmild6 148 231 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02912 Adu-Chr9 116740260 116743879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02912 5 57 RAD5 or RAD16-like Gene Family AT1G61140 52.830 3.66e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02912 - - ahf:112712269 528.094