Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02880 ATGGAGCCTCCACTCCTACCGAAGAAGCCCCTTTCCGATAAAGTTCCGAACTTTGATGCCAACAAACAAGGTGACTCTGCTCACCACCACCCGGCAAGCGCGGTTGCCGAGGACCAGGTCGATGAAGGCGTGGAAGGTGTGAATGTGGATGAAAAGGAGCAGCTTTTGAAGAGTGGTGATAATGGGCTTGAAGGTTCCTCTTGCGTTCAAGAAGTTAGTGTTGTTAAAAAGAAGCGCGGAAGAAAGTCTAAAAAGGACATGCTGGAGGCCTTGGAGATCGCGAGGAAGAAGAAAGGTGATGATGATTCTGCTGCTATGACTGTGAAAATGCGTGAAAGAACAAGTGTTCCAAGTTATGCTGAGGATGTCAAAGAAGAATATGATGATGATGACGAGGGTCTTGGTGAGAAGAAGAGACGTGGCAGAAAACCGAAGAACCAGAAGAAGGAAGAACGCCCTAGTAATGAAAATGAGTCAAAACCTGATATAGATAATGAAGGGGAAGATGCAAATGGCGATGTTCTGGAGAAGAAAACTGGAAGGAAAAGAAAGAACATGGATGGTGAGCAAAAGTGTGAAAATACAAAGATGGAAAATGAGGAGTTGGGGTCTCATTCCAATGCTCAAATTGATGCTGAGACGACTTCAGATTCCTTGGAAAAAAGTGAGAATCAGCGTAGTTACGGTTTAAGGCAGAATCGTGCGGTCAAAATGCAACAAGAGGAGCCAAAAGTCAGGAGAGACCAAAAATTCGTTGAAGAGGAGAGCTTAATGTGCCATCAATGTCAGAGGAATGATAAAGGTGATGTAGTGAGGTGCACTAATTGCAAGACGAAAAGATATTGCATGCCCTGTATAGGCAATTGGTATCCCAATATGAAGCCAGATGAATTTACTCTCTGTCCTGTATGCCGAGGCAATTGTAATTGCAAAGCATGTTTGCGATCTACTGATCTTATTAAGGAAATGAAGAAGAGGAAAAATACCAACAACCATATACCAGTTGATTTCTCTTTGTATTTGCTAAAAGGTGTTCTTCCATATATAAAACAGTTGGATAAAGAACAAACAGCTGAGAAAGAGTTCGAAGCTAAAAGACAAGGGCTTTCACCCTTGGAGCTAAAAATTGAAAAGGCAGATTTTCAACCAAAAGAACGTGTCTACTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGTGAAACGTGCTCTTTTGACCTGTGTCTCAGCTGTTGCCATGAACTTCGTAATGGGAAGCTTTTAGGTGGTCCAGATCCAATTGGGTTCGGGTTTGTCAACCGGGGAATCGGATATCTGCATGGTGAACCAAAACCAGAAGTAAGGGGAAAATCCAATGGATCACAGGTTCAGACTCAGGAATCACAGGCTATTCCTGAACCACGTGGGTGGTCAAGGGATGGGTGGCATGCAGAGAGTGATGGCAGCATACCCTGCCCAAAAGTCACTGAGAAGTGCTGCGGCAGATTTCTGGAGCTGAGAAGTGTATTTGGTCCAAATTTTATCTCCGAGTTAGTACACAAAGCAGATGAGCTAGCAGAAGCATATAAGCTTGACAATTCAGTTGAGATTCCTGATAGCTGGTGCTCATGTTCGACGTTGAGAAACACTGTTGATAAAAATACAAGGAAGGCAGCTTCCCGTGAAGATTCCAGTGACAACTTTTTATACTGCCCGTCAGCTTTAGATCTACAACAGCATGATGATGTAAAACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTGATTGTCAGCAATGTGCTCGATTGTTCATCGGGTTTGAGCTGGGAACCACTTGTCATGTGGCGTGCATGTCGTCAGATAACTAACACCAAGCATGGTATACATTTGGATGTTAAGGCACTTGATTGCTTAGATTGGTGCGAGGGAGATATTAATATCCACCAATTCTTTACTGGGTATTCAAAAGGACGTAAAGATTGGCTTAACTGGCCTCAGATACTGAAATTAAAAGATTGGCCACCTTCTAATTTATTTGAGGAACGTTTACCACGTCACTGTGCTGAGTTTATATCATCCTTGCCCTACAAGGATTATACGGATCCTCTTATTGGTGCTCTTAATCTTGCTGTGAAGTTGCCGAAGGAAAGTATAAAGCCAGACATGGGGCCGAAGACATATATCGCTTATGGATTTCCGGAAGAGCTTGGGCGTGGGGATTCGGTGACTAAGCTCCACTGCGATATGTCTGATGCAGTAAATGTGCTAACTCACATTGCTGAAGTGGAATTGGATTCTGACACACGTGAAGCGATTGAGACATACAAAGCAAAGCACCTAAAGCAGGACCAGAGGGAATTGTATGGAGTTCATGAGGGAGAAACTACTGATGACATGCATAATGATTCATGTTCAGCCATAAATGCTTCTGACAAGCAAAATGGCTCTAAAGTTGTGGAAAATGAAAGTGGACTATGTGACATGAAAGTGGATGAACAGTTTCATCAAGCTTCTGGTAATGAGAGTGCAGCTGTAAATATGGATGGTCTTTGCCGTGGGTCAGAGTTGAAAGAGGCTGAAAAAGCGCAAGAACAAGAAAAAAGTACGTCAGATGCCTCTGATGGTGCTCTCTGGGATATTTTTCGAAGAGAGGATATTCCTAAATTGCAGGAATATCTGAAAAATCATTTTGGAGAGTTTAGACATGTGTATTGCAGTCCTTTGACACAGATCATTCACCCCATCCATGATCAGACCATGTATTTGACTGAGTATCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTCGTTCAGAGGTTAGGAGAAGCTGTTTTCATTCCAGCAGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCCCTTGATTTTGTATCTCCTGAAAATCTTGGTGAGTGCTTCCGATTGACAGAGGAATTCCGCACACTCCCAATAAATCACAGGTCTTCTGAGGACAAGTTGGAGGTGAAGAAAATTACAGTACACACAATGAAAAATGTGGTTAAAAATTTGGAGGAAGCACGGTCTGGGAAAAGAGAGGTTCAGGATGTAAGTAAATACAACCGCAAGAGAATGAAGTCAAAAAAGATGATTTGGTAG 3135 0.4287 MEPPLLPKKPLSDKVPNFDANKQGDSAHHHPASAVAEDQVDEGVEGVNVDEKEQLLKSGDNGLEGSSCVQEVSVVKKKRGRKSKKDMLEALEIARKKKGDDDSAAMTVKMRERTSVPSYAEDVKEEYDDDDEGLGEKKRRGRKPKNQKKEERPSNENESKPDIDNEGEDANGDVLEKKTGRKRKNMDGEQKCENTKMENEELGSHSNAQIDAETTSDSLEKSENQRSYGLRQNRAVKMQQEEPKVRRDQKFVEEESLMCHQCQRNDKGDVVRCTNCKTKRYCMPCIGNWYPNMKPDEFTLCPVCRGNCNCKACLRSTDLIKEMKKRKNTNNHIPVDFSLYLLKGVLPYIKQLDKEQTAEKEFEAKRQGLSPLELKIEKADFQPKERVYCDNCKTSIFDYHRSCETCSFDLCLSCCHELRNGKLLGGPDPIGFGFVNRGIGYLHGEPKPEVRGKSNGSQVQTQESQAIPEPRGWSRDGWHAESDGSIPCPKVTEKCCGRFLELRSVFGPNFISELVHKADELAEAYKLDNSVEIPDSWCSCSTLRNTVDKNTRKAASREDSSDNFLYCPSALDLQQHDDVKHFQWHWSKGEPVIVSNVLDCSSGLSWEPLVMWRACRQITNTKHGIHLDVKALDCLDWCEGDINIHQFFTGYSKGRKDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPYKDYTDPLIGALNLAVKLPKESIKPDMGPKTYIAYGFPEELGRGDSVTKLHCDMSDAVNVLTHIAEVELDSDTREAIETYKAKHLKQDQRELYGVHEGETTDDMHNDSCSAINASDKQNGSKVVENESGLCDMKVDEQFHQASGNESAAVNMDGLCRGSELKEAEKAQEQEKSTSDASDGALWDIFRREDIPKLQEYLKNHFGEFRHVYCSPLTQIIHPIHDQTMYLTEYHKRKLKEEYGIEPWTFVQRLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENLGECFRLTEEFRTLPINHRSSEDKLEVKKITVHTMKNVVKNLEEARSGKREVQDVSKYNRKRMKSKKMIW 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02880 1044 ProSiteProfiles Zinc finger RING-type profile. 259 305 IPR001841 -
Adu09g02880 1044 Pfam JmjC domain, hydroxylase 873 969 IPR003347 -
Adu09g02880 1044 MobiDBLite consensus disorder prediction 201 234 - -
Adu09g02880 1044 MobiDBLite consensus disorder prediction 93 108 - -
Adu09g02880 1044 MobiDBLite consensus disorder prediction 147 200 - -
Adu09g02880 1044 MobiDBLite consensus disorder prediction 449 473 - -
Adu09g02880 1044 PANTHER - 94 1014 - -
Adu09g02880 1044 SUPERFAMILY Clavaminate synthase-like 578 1007 - -
Adu09g02880 1044 MobiDBLite consensus disorder prediction 1 41 - -
Adu09g02880 1044 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 94 1014 IPR045109 GO:0032454|GO:0033169
Adu09g02880 1044 SMART cupin_9 680 986 IPR003347 -
Adu09g02880 1044 MobiDBLite consensus disorder prediction 453 468 - -
Adu09g02880 1044 ProSiteProfiles JmjC domain profile. 699 986 IPR003347 -
Adu09g02880 1044 MobiDBLite consensus disorder prediction 93 247 - -
Adu09g02880 1044 Gene3D Cupin 566 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02880 Adu-Chr9 116495172 116502020 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu09g02880 JmjC 6.3e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02880 K15601 - gmx:100805723 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02880 09 116495172 116502020 Adu09g02880 09 116495172 116502020 ECH