Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu09g02877 | ATGCAATCTATCCGAAAATCGTTCAAGTCCTATGCTTCCTACAACAAACGTTCTAGAAGGTTTGCCGCGTCGGGAGGACCCGATTCTAGCCACGAGCACCTTCCAATCCTTCAAGACCAGGAATCTCATCATCATCATCGTCACCAACACCACCATTCTGACCCTCCTCCGTTATCCTCCATGGCCGGCGACTACGTCGTCAAGATCAATGACGGCGGCGATCCTGCCGGAGGAAACAAGATTTGGAGGGGTTCCAGCTACGAGTTCTGGCCCGAAGATGGAAGTTCCGGCGACAATGCCGATGCCAAAGAGGTGAGCTTTGATTTCCGCCAATCTGGTGCGCCGCCGGTGCCGGAGGAGGACCCGCCGTCGCAGCTGATCGGAAGCTTCCTGCGCAAACAGATAGCTTCTGGTGAGATCTCGTTGGACATGGACATGGAGATGGAGGAGCTTCAGCGCAACTACGATGCCGGTGCAAGTACCGCCGCTGCCGCAGGAGGGAAGCTTTCGCCGGTGGAGGAGTCGCCGACGACGAGCATGAACAACCGCGTATCCAAGGAGCTCAAGGTTTCGTTCGAGGAACCCGCGCCACCGAATTTGATGGCTGATATGCCTAATAGCTCCGATGCCATCAGAAGAAGACACAGCAGGGACTTGCCGTCCATTGGAGATTTCCATCGGCCGCCGCATCCGCCGCACCAGAGCAGGGAATTGCCGTCTCGGAGTGGCCATAGCGGTGATGGCGAGGTTGTGAGGTGCACCTCTAACGGTTCCATAGAGAGAACTCTTTCCATGCAGAGCAGAAAATCAACATTGTTGAAGACTAAAACCCGGTCCAGGTTGCTGGACCCACCAGAAGAACCAGAAAGAACATCGGGTCGGATTGCCAAGTCGGGTCAGTTGTTCTCAGGGTTGCTTGGGAAGAAGAGTGGTGGTGATGACGATGATGAAGATGATCCATTTTTGGAAGAGGATCTTCCTGATAAGTATAAAAAATCTCACTTTAGTATATGGGTTTTGCTTGAATGGTTGGGGTTGATTTTGATAATTGCTGCATTGATTACAACTCTGAGTGTTCCTTTCTTAAGGGAGAAGAATCTTTGGCAGCTGAAGCTGTGGAAATGGGAGGTTATGATTCTTGTGTTGATATGTGGAAGGTTGGTATCTGGTTGGCTTATCAGAGTAGCTGTGTTCTGCATTGAGAGAAACTTCCTTTTGAGGAAGAGGGTTCTGTATTTTGTGTATGGTGTGAAGCATGCTGTTCAGAATTGTGTTTGGTTAGGGCTTGTTTTGATAGCTTGGCACTTCTTGTTTGATCAGAAAGTTCAGAGAGAGGTTCATAGTAATTTTCTTGAGTATATTACCAAGTTTTTGGTGTGCTTGTTGGTTGGTACTCTGGTTTGGTTGGTGAAAACCCTTATGGTTAAGGTTCTGGCCTCTAGTTTCCATGTTAGCACATATTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTTATTGAGACACTCTCCGGGCCGCCTTTGGTCGAACTTCAGCGATATGAGGATGAGGAGCAAAGGATTCTTGAAGATGTCGAGAAGCTACAGAAAGCCGGAGTTACCATACCTCCTGACCTGAGGGCTACTGCCTTCGCGACCAACAAGAGTGGGAAGTTGAGGAGTGGGATGCTCCAGAAAAGCCCCAGGATGGTAAGTGGACGGTTCTCGAGACCTCTCTCTAAGAAGTCAGAAGATGGGAATAGTGGGATAACTATTGATCACCTGCATAAGCTGAATCCGAACAATGTCTCGGCTTGGAATATGAAAAGGCTGATCAATATGGTTCGGCATGGAGCTCTAACTACATTGGATGAACAGATACTTAACTCGACCAATGATGATGAGAATGCCACAGAGATTAGAAGTGAAAATCAGGCAAAAGGAGCAGCCAAGAAAATTTTTCAGAATGTTGCTTGTGGTAGCAGGTTCATATACAAGAAGGACTTACAGCGATTTATGCAAGAAGATGAAGTTGTGAAAACCTTGAGTCTCTTTGAAGGTGCATCCGAGACCGGAAGAATAAGCAAAGCATCCTTGAAGAACTGGGTGGTCAATGCCTTTAGAGAGAGGAGAGCACTCGCCTTGACATTGAATGATACGAAAACGGCGGTGAACAAGCTTCATCGAATGCTTAATTTCTTAGTTGCAATTATTATCCTAGTTATCTTTCTCTTGATAATGGGAATTGCCACCTCCAAATTTCTCCTCTTCGTGAGCTCACAGCTTGTCTTGGTTGCATTCATATTTGGAAATACCTGCAAGACCATATTTGAAGCCATTATTTTCTTATTTGTAATGCACCCGTTTGACGTTGGAGACAGATGCGAAATTGAAGGGGTCCAGATGGTTGTGGAAGAAATGAACATATTGAACACCATATTTCTGAGATATGATAATTTAAAGGTAATGATCCCTAACAGTGTCCTTGCTACAAAGGCCATAAACAACTTCTACCGCAGTCCTGACATGGGAGATTCTGTTGAATTCCTTATTCATGTGTCTACACCAATGGAAAAGTTTACTCAAATGAAACACAGAATACAGAGTTACATTGATAACAAGAAGGAGCACTGGTATCCATCACCATTTATAGTCTTCAAGGATTGTGAACTCTTAAACATGGTTCGAATTGCGGTTTGGCCAACGCACAGGATGAACTTCCAAGACATGGGAGAGAGATTCATAAGGAGGTCATTGTTGATCGACGAGATGATCAAGATTTTCCGGGAGCTTGACATACAGTACCGGCTGCAGCCGCTCGATATTAGTATTAGAAGCATGCCTACCACTTCTGAGCGTCTTCCACCAAGTTGGTCAACAATCACAAGTTGA | 2874 | 0.4614 | MQSIRKSFKSYASYNKRSRRFAASGGPDSSHEHLPILQDQESHHHHRHQHHHSDPPPLSSMAGDYVVKINDGGDPAGGNKIWRGSSYEFWPEDGSSGDNADAKEVSFDFRQSGAPPVPEEDPPSQLIGSFLRKQIASGEISLDMDMEMEELQRNYDAGASTAAAAGGKLSPVEESPTTSMNNRVSKELKVSFEEPAPPNLMADMPNSSDAIRRRHSRDLPSIGDFHRPPHPPHQSRELPSRSGHSGDGEVVRCTSNGSIERTLSMQSRKSTLLKTKTRSRLLDPPEEPERTSGRIAKSGQLFSGLLGKKSGGDDDDEDDPFLEEDLPDKYKKSHFSIWVLLEWLGLILIIAALITTLSVPFLREKNLWQLKLWKWEVMILVLICGRLVSGWLIRVAVFCIERNFLLRKRVLYFVYGVKHAVQNCVWLGLVLIAWHFLFDQKVQREVHSNFLEYITKFLVCLLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQRYEDEEQRILEDVEKLQKAGVTIPPDLRATAFATNKSGKLRSGMLQKSPRMVSGRFSRPLSKKSEDGNSGITIDHLHKLNPNNVSAWNMKRLINMVRHGALTTLDEQILNSTNDDENATEIRSENQAKGAAKKIFQNVACGSRFIYKKDLQRFMQEDEVVKTLSLFEGASETGRISKASLKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIFLLIMGIATSKFLLFVSSQLVLVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIEGVQMVVEEMNILNTIFLRYDNLKVMIPNSVLATKAINNFYRSPDMGDSVEFLIHVSTPMEKFTQMKHRIQSYIDNKKEHWYPSPFIVFKDCELLNMVRIAVWPTHRMNFQDMGERFIRRSLLIDEMIKIFRELDIQYRLQPLDISIRSMPTTSERLPPSWSTITS | 957 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu09g02877 | 957 | SUPERFAMILY | Sm-like ribonucleoproteins | 772 | 831 | IPR010920 | - | |
Adu09g02877 | 957 | MobiDBLite | consensus disorder prediction | 219 | 234 | - | - | |
Adu09g02877 | 957 | Coils | Coil | 512 | 532 | - | - | |
Adu09g02877 | 957 | MobiDBLite | consensus disorder prediction | 219 | 294 | - | - | |
Adu09g02877 | 957 | Gene3D | - | 782 | 831 | IPR023408 | - | |
Adu09g02877 | 957 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 4 | 954 | - | - | |
Adu09g02877 | 957 | MobiDBLite | consensus disorder prediction | 279 | 293 | - | - | |
Adu09g02877 | 957 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 4 | 954 | IPR016688 | - | |
Adu09g02877 | 957 | MobiDBLite | consensus disorder prediction | 249 | 272 | - | - | |
Adu09g02877 | 957 | PIRSF | Memb_At2g17000 | 36 | 957 | IPR016688 | - | |
Adu09g02877 | 957 | MobiDBLite | consensus disorder prediction | 19 | 78 | - | - | |
Adu09g02877 | 957 | Pfam | Mechanosensitive ion channel | 724 | 928 | IPR006685 | GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu09g02877 | Adu-Chr9 | 116414710 | 116419363 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu09g02877 | 70 | 957 | Mechanosensitive Ion Channel Family | AT1G78610 | 55.700 | 0.0 | 913 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu09g02877 | K22048 | - | gmx:102665658 | 1281.16 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu09g02877 | 09 | 116414710 | 116419363 | Adu09g02877 | 09 | 116414710 | 116419363 | ECH |