Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02877 ATGCAATCTATCCGAAAATCGTTCAAGTCCTATGCTTCCTACAACAAACGTTCTAGAAGGTTTGCCGCGTCGGGAGGACCCGATTCTAGCCACGAGCACCTTCCAATCCTTCAAGACCAGGAATCTCATCATCATCATCGTCACCAACACCACCATTCTGACCCTCCTCCGTTATCCTCCATGGCCGGCGACTACGTCGTCAAGATCAATGACGGCGGCGATCCTGCCGGAGGAAACAAGATTTGGAGGGGTTCCAGCTACGAGTTCTGGCCCGAAGATGGAAGTTCCGGCGACAATGCCGATGCCAAAGAGGTGAGCTTTGATTTCCGCCAATCTGGTGCGCCGCCGGTGCCGGAGGAGGACCCGCCGTCGCAGCTGATCGGAAGCTTCCTGCGCAAACAGATAGCTTCTGGTGAGATCTCGTTGGACATGGACATGGAGATGGAGGAGCTTCAGCGCAACTACGATGCCGGTGCAAGTACCGCCGCTGCCGCAGGAGGGAAGCTTTCGCCGGTGGAGGAGTCGCCGACGACGAGCATGAACAACCGCGTATCCAAGGAGCTCAAGGTTTCGTTCGAGGAACCCGCGCCACCGAATTTGATGGCTGATATGCCTAATAGCTCCGATGCCATCAGAAGAAGACACAGCAGGGACTTGCCGTCCATTGGAGATTTCCATCGGCCGCCGCATCCGCCGCACCAGAGCAGGGAATTGCCGTCTCGGAGTGGCCATAGCGGTGATGGCGAGGTTGTGAGGTGCACCTCTAACGGTTCCATAGAGAGAACTCTTTCCATGCAGAGCAGAAAATCAACATTGTTGAAGACTAAAACCCGGTCCAGGTTGCTGGACCCACCAGAAGAACCAGAAAGAACATCGGGTCGGATTGCCAAGTCGGGTCAGTTGTTCTCAGGGTTGCTTGGGAAGAAGAGTGGTGGTGATGACGATGATGAAGATGATCCATTTTTGGAAGAGGATCTTCCTGATAAGTATAAAAAATCTCACTTTAGTATATGGGTTTTGCTTGAATGGTTGGGGTTGATTTTGATAATTGCTGCATTGATTACAACTCTGAGTGTTCCTTTCTTAAGGGAGAAGAATCTTTGGCAGCTGAAGCTGTGGAAATGGGAGGTTATGATTCTTGTGTTGATATGTGGAAGGTTGGTATCTGGTTGGCTTATCAGAGTAGCTGTGTTCTGCATTGAGAGAAACTTCCTTTTGAGGAAGAGGGTTCTGTATTTTGTGTATGGTGTGAAGCATGCTGTTCAGAATTGTGTTTGGTTAGGGCTTGTTTTGATAGCTTGGCACTTCTTGTTTGATCAGAAAGTTCAGAGAGAGGTTCATAGTAATTTTCTTGAGTATATTACCAAGTTTTTGGTGTGCTTGTTGGTTGGTACTCTGGTTTGGTTGGTGAAAACCCTTATGGTTAAGGTTCTGGCCTCTAGTTTCCATGTTAGCACATATTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTTATTGAGACACTCTCCGGGCCGCCTTTGGTCGAACTTCAGCGATATGAGGATGAGGAGCAAAGGATTCTTGAAGATGTCGAGAAGCTACAGAAAGCCGGAGTTACCATACCTCCTGACCTGAGGGCTACTGCCTTCGCGACCAACAAGAGTGGGAAGTTGAGGAGTGGGATGCTCCAGAAAAGCCCCAGGATGGTAAGTGGACGGTTCTCGAGACCTCTCTCTAAGAAGTCAGAAGATGGGAATAGTGGGATAACTATTGATCACCTGCATAAGCTGAATCCGAACAATGTCTCGGCTTGGAATATGAAAAGGCTGATCAATATGGTTCGGCATGGAGCTCTAACTACATTGGATGAACAGATACTTAACTCGACCAATGATGATGAGAATGCCACAGAGATTAGAAGTGAAAATCAGGCAAAAGGAGCAGCCAAGAAAATTTTTCAGAATGTTGCTTGTGGTAGCAGGTTCATATACAAGAAGGACTTACAGCGATTTATGCAAGAAGATGAAGTTGTGAAAACCTTGAGTCTCTTTGAAGGTGCATCCGAGACCGGAAGAATAAGCAAAGCATCCTTGAAGAACTGGGTGGTCAATGCCTTTAGAGAGAGGAGAGCACTCGCCTTGACATTGAATGATACGAAAACGGCGGTGAACAAGCTTCATCGAATGCTTAATTTCTTAGTTGCAATTATTATCCTAGTTATCTTTCTCTTGATAATGGGAATTGCCACCTCCAAATTTCTCCTCTTCGTGAGCTCACAGCTTGTCTTGGTTGCATTCATATTTGGAAATACCTGCAAGACCATATTTGAAGCCATTATTTTCTTATTTGTAATGCACCCGTTTGACGTTGGAGACAGATGCGAAATTGAAGGGGTCCAGATGGTTGTGGAAGAAATGAACATATTGAACACCATATTTCTGAGATATGATAATTTAAAGGTAATGATCCCTAACAGTGTCCTTGCTACAAAGGCCATAAACAACTTCTACCGCAGTCCTGACATGGGAGATTCTGTTGAATTCCTTATTCATGTGTCTACACCAATGGAAAAGTTTACTCAAATGAAACACAGAATACAGAGTTACATTGATAACAAGAAGGAGCACTGGTATCCATCACCATTTATAGTCTTCAAGGATTGTGAACTCTTAAACATGGTTCGAATTGCGGTTTGGCCAACGCACAGGATGAACTTCCAAGACATGGGAGAGAGATTCATAAGGAGGTCATTGTTGATCGACGAGATGATCAAGATTTTCCGGGAGCTTGACATACAGTACCGGCTGCAGCCGCTCGATATTAGTATTAGAAGCATGCCTACCACTTCTGAGCGTCTTCCACCAAGTTGGTCAACAATCACAAGTTGA 2874 0.4614 MQSIRKSFKSYASYNKRSRRFAASGGPDSSHEHLPILQDQESHHHHRHQHHHSDPPPLSSMAGDYVVKINDGGDPAGGNKIWRGSSYEFWPEDGSSGDNADAKEVSFDFRQSGAPPVPEEDPPSQLIGSFLRKQIASGEISLDMDMEMEELQRNYDAGASTAAAAGGKLSPVEESPTTSMNNRVSKELKVSFEEPAPPNLMADMPNSSDAIRRRHSRDLPSIGDFHRPPHPPHQSRELPSRSGHSGDGEVVRCTSNGSIERTLSMQSRKSTLLKTKTRSRLLDPPEEPERTSGRIAKSGQLFSGLLGKKSGGDDDDEDDPFLEEDLPDKYKKSHFSIWVLLEWLGLILIIAALITTLSVPFLREKNLWQLKLWKWEVMILVLICGRLVSGWLIRVAVFCIERNFLLRKRVLYFVYGVKHAVQNCVWLGLVLIAWHFLFDQKVQREVHSNFLEYITKFLVCLLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQRYEDEEQRILEDVEKLQKAGVTIPPDLRATAFATNKSGKLRSGMLQKSPRMVSGRFSRPLSKKSEDGNSGITIDHLHKLNPNNVSAWNMKRLINMVRHGALTTLDEQILNSTNDDENATEIRSENQAKGAAKKIFQNVACGSRFIYKKDLQRFMQEDEVVKTLSLFEGASETGRISKASLKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIFLLIMGIATSKFLLFVSSQLVLVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIEGVQMVVEEMNILNTIFLRYDNLKVMIPNSVLATKAINNFYRSPDMGDSVEFLIHVSTPMEKFTQMKHRIQSYIDNKKEHWYPSPFIVFKDCELLNMVRIAVWPTHRMNFQDMGERFIRRSLLIDEMIKIFRELDIQYRLQPLDISIRSMPTTSERLPPSWSTITS 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02877 957 SUPERFAMILY Sm-like ribonucleoproteins 772 831 IPR010920 -
Adu09g02877 957 MobiDBLite consensus disorder prediction 219 234 - -
Adu09g02877 957 Coils Coil 512 532 - -
Adu09g02877 957 MobiDBLite consensus disorder prediction 219 294 - -
Adu09g02877 957 Gene3D - 782 831 IPR023408 -
Adu09g02877 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 954 - -
Adu09g02877 957 MobiDBLite consensus disorder prediction 279 293 - -
Adu09g02877 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 954 IPR016688 -
Adu09g02877 957 MobiDBLite consensus disorder prediction 249 272 - -
Adu09g02877 957 PIRSF Memb_At2g17000 36 957 IPR016688 -
Adu09g02877 957 MobiDBLite consensus disorder prediction 19 78 - -
Adu09g02877 957 Pfam Mechanosensitive ion channel 724 928 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02877 Adu-Chr9 116414710 116419363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02877 70 957 Mechanosensitive Ion Channel Family AT1G78610 55.700 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02877 K22048 - gmx:102665658 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02877 09 116414710 116419363 Adu09g02877 09 116414710 116419363 ECH