Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02845 ATGTCTTGTCATTTTCACCAAGGGAATGGTGTCATGCCTATTCTCTTCTTCAAGATTATACTCAAAACTAATCTTAAAAGTCTTAAAATACCCGACAATTTTGCACTGAAACATGGAAGTGGTTTGTCCAATCCAGTGTTCTTAAAGCCTCCAGATGGAACAAGGTGGAAGGTGTGTTTGAAAAAAAAGAATGATCAAGTTTGGTTTGAAAAGGGTTGGGAAGAATTTACTCAAAATTACTCTCTGGATCACGGATGCTTGGTTCTGTTTAAATATGAAGGAACTACTTCTTCCCAATTTGATGTCATTATCATTGATGACAGTGCTTTAGAAATAGACTATTCTTCGTATGGAAATGATGATGATGATGTTTCAGTTCAGATTGCGAAGGAAATCCATCCATACAAGAAGAACAAAGAAACCATGAGAGGTGAGAAGAATGTGACTACTTCTTTGTCATTGAATTGGCCAAGGGAACCAAGAGCACGAGAAGAAGCTATCAAATTCGTATCTAACAACCCTTTTTTCACGGTGCTCCTAAAGGCTCCTCATATCACACAATACCTACTGTGCATACCAGTTTTGGAAGGTTATGTGGATAATGGAGTGAAGAATGTGAAGCTTGAGTATAGGGATAGATCGTGGCCTGTGAGGATGCTTAGTTGTAACAAAACCTATTCAAATCGCTTCTTTTCTGCTGGATGGAACTTGTTTGCACAAGAGAATGAGTTGAAGCCTGGAGATGTTTGTGTCTTTGAACTTGTTAATATGCAAGATTTGGTCTTTAAGAATGTGCATCCAATGAAGCTAATATGCAACCAAGGCAGCCGTATAGTAGGGCATAGTAGCTGGTGGTGGTGTTGCTCTTCTTTATGGATCAAGTGA 885 0.3876 MSCHFHQGNGVMPILFFKIILKTNLKSLKIPDNFALKHGSGLSNPVFLKPPDGTRWKVCLKKKNDQVWFEKGWEEFTQNYSLDHGCLVLFKYEGTTSSQFDVIIIDDSALEIDYSSYGNDDDDVSVQIAKEIHPYKKNKETMRGEKNVTTSLSLNWPREPRAREEAIKFVSNNPFFTVLLKAPHITQYLLCIPVLEGYVDNGVKNVKLEYRDRSWPVRMLSCNKTYSNRFFSAGWNLFAQENELKPGDVCVFELVNMQDLVFKNVHPMKLICNQGSRIVGHSSWWWCCSSLWIK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02845 294 Gene3D - 13 109 IPR015300 -
Adu09g02845 294 ProSiteProfiles B3 DNA-binding domain profile. 175 268 IPR003340 GO:0003677
Adu09g02845 294 PANTHER B3 DOMAIN-CONTAINING 13 264 - -
Adu09g02845 294 CDD B3_DNA 175 256 IPR003340 GO:0003677
Adu09g02845 294 Pfam B3 DNA binding domain 24 103 IPR003340 GO:0003677
Adu09g02845 294 Pfam B3 DNA binding domain 175 258 IPR003340 GO:0003677
Adu09g02845 294 SUPERFAMILY DNA-binding pseudobarrel domain 171 262 IPR015300 -
Adu09g02845 294 SUPERFAMILY DNA-binding pseudobarrel domain 15 106 IPR015300 -
Adu09g02845 294 CDD B3_DNA 15 106 IPR003340 GO:0003677
Adu09g02845 294 ProSiteProfiles B3 DNA-binding domain profile. 13 108 IPR003340 GO:0003677
Adu09g02845 294 Gene3D - 157 269 IPR015300 -
Adu09g02845 294 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 13 264 - -
Adu09g02845 294 SMART B3_2 176 268 IPR003340 GO:0003677
Adu09g02845 294 SMART B3_2 16 108 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02845 Adu-Chr9 116127503 116131954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02845 120 263 B3 DNA Binding Superfamily AT3G18990 32.450 3.19e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu09g02845 B3 4.9e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02845 - - lang:109346569 271.937