Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02842 ATGTCTTCTTCTTCTCAGTGGCGTGGCAAGGCTATAATCCCTATCCACTTCTCAGCTATTATCTTCAATAAAACTGATCTTCAGACTCTGAAAATATCAAGTAAATTTACAAGGAGATATGGAGGTGGTTTGTCGAATCCATTGTTTTTGAAGCCTCCAGATGGCACCAAATGGGAAGTGAATTGGACTAGAAAAAATGATGATGAGGTTTGGTTCCAAAAGGGTTGGAACAAATTCACTGAAAACTACTCCTTAGATCATGGCCACTTGATTCTTTTCACCTATCATGGAAATTCACAACTTGATGTTCACATCTTTGACAAATCTGCCTCTGAAATACTCTATCCGGGGTTAAAGTTAAACACTACTCCTACTACTACTGCTTGTGATGATGAAAAGAACATCAAACTTGATCTCATGCACAATGATGATGATGATGATGACTCCATTGAGATTTTGAAGCCTTGTAAACACAAACGCAGCATGCTAGTGTTGGTTCCTCAACCTTGTAATAAAAGAATGAAAGCAGATGAGAAGAAGAAGGTTGCTGAAAGAAGATCAAGTTGTTCATCATTGAATTGGCCAAAGCAAGAAAGAGCACAGGAAGTAGCTATGAACTTCGTGTCTGATAATCCTTTCTTCACAATGTTCATAACCCATGGTGTGCCAAACATGAAAGAGTATACTGATGAGGATGAGAAGGATGTGGAGCTGAAAATTGGGGAGAAATCGTGGAAAGTCAAACTGAGGCGTGGTAGCAACTCTTCAAATTGTCGGTACTTGGGTGGTGGATGGTCCTTGTTTGCAGATGAGAGTGAATTGCTTCCTGGAGATGTTTGTGTCTTTGAGCTCATCAACATTCATCCTTTGCAGTTTAGGGTTCATATTTTCAAAAAGCAGCAGAGTTAG 909 0.396 MSSSSQWRGKAIIPIHFSAIIFNKTDLQTLKISSKFTRRYGGGLSNPLFLKPPDGTKWEVNWTRKNDDEVWFQKGWNKFTENYSLDHGHLILFTYHGNSQLDVHIFDKSASEILYPGLKLNTTPTTTACDDEKNIKLDLMHNDDDDDDSIEILKPCKHKRSMLVLVPQPCNKRMKADEKKKVAERRSSCSSLNWPKQERAQEVAMNFVSDNPFFTMFITHGVPNMKEYTDEDEKDVELKIGEKSWKVKLRRGSNSSNCRYLGGGWSLFADESELLPGDVCVFELINIHPLQFRVHIFKKQQS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02842 302 ProSiteProfiles B3 DNA-binding domain profile. 15 109 IPR003340 GO:0003677
Adu09g02842 302 PANTHER B3 DOMAIN-CONTAINING 13 299 - -
Adu09g02842 302 SUPERFAMILY DNA-binding pseudobarrel domain 209 299 IPR015300 -
Adu09g02842 302 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 13 299 - -
Adu09g02842 302 SUPERFAMILY DNA-binding pseudobarrel domain 21 116 IPR015300 -
Adu09g02842 302 Gene3D - 14 111 IPR015300 -
Adu09g02842 302 Pfam B3 DNA binding domain 27 108 IPR003340 GO:0003677
Adu09g02842 302 Pfam B3 DNA binding domain 233 299 IPR003340 GO:0003677
Adu09g02842 302 CDD B3_DNA 234 298 IPR003340 GO:0003677
Adu09g02842 302 Gene3D - 194 301 IPR015300 -
Adu09g02842 302 CDD B3_DNA 30 107 IPR003340 GO:0003677
Adu09g02842 302 ProSiteProfiles B3 DNA-binding domain profile. 243 300 IPR003340 GO:0003677
Adu09g02842 302 SMART B3_2 213 300 IPR003340 GO:0003677
Adu09g02842 302 SMART B3_2 22 109 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02842 Adu-Chr9 116107717 116108830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02842 17 298 B3 DNA Binding Superfamily AT3G18990 28.693 2.22e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu09g02842 B3 7.4e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02842 - - aip:107616196 533.487