Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02840 ATGGCAACTTGTGGAAGAGAAGGAGCCGTGAGACAGTACATAAGATCCAAGGTTCCTCGTTTGAGATGGACTCCTGAGCTTCATCGATGCTTTGTTCATGCCATTGATAGCCTTGGAGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTTGATGGACGTTAAAGGCCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGACTTGGGAAGACAAGGTAGGATTTCATCAAGCCAACATAGGAACCAATCTTTTGAGGAACATGATGATGGATGTGTTGAAGAAGTGAATGATGTTAATAATAACAATAATAATCATAATCAAAACTATCATCCATGTTCACAATCCATTGGAAAAGAATCCGATTCTCTCTTCGGATACAGTAACTTCTCCCCAAAAAGGGCTAGAATAGAGAGAAACTATTCCATATCTCAGAACCTGCAATGCAGGAACCAAAGAACAGTGCCGTATCCGTACTCCTTTTATGATTATGCTTATTCAACTCAACAACAACAACATCAACCACCTCATTCCACAGTTTTCCCTATGCTGCCACCACTTCTTGGAAATTTCCTCCAGGTTACTAAATTAAATGATAGAGAGACCACTTCGGAGCCAATGACTAATAATAATAATAATAATAATAATGTACTTTTGAACATCAACAAAAACAACAACACTGAAAAGAAGGCACGTGCAGAAGAAGATGAAGATGAAGATGTAGGGAGAGAGTGTGAGTTGTCATTGTCTCTCACATTGCCAAATCCTTCACCCCAGAGAAGTAGTAATGTTTCTTCAGCCAGTGAGATCACTGAGGCTGCTATTTCTTCATCATGTTCCACTACTCTCAAACATAGGATTAATTTAGACTTGTCTCTATCCCTTTGTTGA 915 0.4 MATCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRISSSQHRNQSFEEHDDGCVEEVNDVNNNNNNHNQNYHPCSQSIGKESDSLFGYSNFSPKRARIERNYSISQNLQCRNQRTVPYPYSFYDYAYSTQQQQHQPPHSTVFPMLPPLLGNFLQVTKLNDRETTSEPMTNNNNNNNNVLLNINKNNNTEKKARAEEDEDEDVGRECELSLSLTLPNPSPQRSSNVSSASEITEAAISSSCSTTLKHRINLDLSLSLC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02840 304 MobiDBLite consensus disorder prediction 209 251 - -
Adu09g02840 304 Gene3D - 18 74 - -
Adu09g02840 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Adu09g02840 304 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Adu09g02840 304 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Adu09g02840 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Adu09g02840 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 182 IPR044848 GO:0003700
Adu09g02840 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 174 304 IPR044848 GO:0003700
Adu09g02840 304 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 2 182 - -
Adu09g02840 304 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 174 304 - -
Adu09g02840 304 MobiDBLite consensus disorder prediction 78 97 - -
Adu09g02840 304 MobiDBLite consensus disorder prediction 209 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02840 Adu-Chr9 116075930 116079557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02840 1 74 G2-like Transcription Factor Family AT1G14600 73.418 3.34e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu09g02840 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02840 - - ahf:112712187 531.176