Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02799 ATGTTTCAGGAGACCGCCGCCGTGGCCACTCGGTGGGGGACTGAAGCGGTGGAGGTGCGGATGAATCACTGGACTAGGGAGCAGGATAAGGTCTTCGAGAGAGCCTTGCTTTTCGTGCCGGAGGACTTACCGGACCGCTGGGACAAGATCGCCGAGCAGGTTCCCGGCAAGTCAGCCGTCGATGTCAGGGACCGCTACGAGGCTTTGGTCCGCGACGTCTATGAAATCGACTCGGGACGAGTCGAGGTGCCGAGTTACTCGGATGACTCGGCGGGTAGTGGCGGCGGCGGTGGTGGTGGGGGAGGGTTGTCTTCTTGGGACTCAGCGAATCAGATCTCGTTCGGGTCAAAACCTAGGAATAGCGACAACGAGAGGAAGAAAGGTACTCCTTGGACGGAAGAGGAACACAGATTGTTTTTGATTGGGCTAAAGAAATTTGGGAAGGGAGATTGGAGAAGCATTTCAAGGAATGTGGTTGTTACAAGAACACCTACTCAAGTAGCTAGCCATGCCCAAAAGTACTTTTTACGCCAGAATTCGGGGAAGAAAGAGAGGAAGAGATCAAGCATCCATGACATAACCACGGTGGATAGCAACTCTGTGCCTGTGCCTGTTGATCAGAATTGGGTTGCTCCTCCACAGCAAGAGATGCAGCAACAGCAACAGCAACATCACCAGCACTTTAATCCGCACAATCATGTGGGTGCTGGTGGGTTTGGGTATTCAAACTACGGTGGCTTTTGA 744 0.5323 MFQETAAVATRWGTEAVEVRMNHWTREQDKVFERALLFVPEDLPDRWDKIAEQVPGKSAVDVRDRYEALVRDVYEIDSGRVEVPSYSDDSAGSGGGGGGGGGLSSWDSANQISFGSKPRNSDNERKKGTPWTEEEHRLFLIGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSGKKERKRSSIHDITTVDSNSVPVPVDQNWVAPPQQEMQQQQQQHHQHFNPHNHVGAGGFGYSNYGGF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02799 247 Gene3D - 129 180 - -
Adu09g02799 247 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
Adu09g02799 247 ProSiteProfiles Myb-like domain profile. 16 70 IPR001005 -
Adu09g02799 247 SMART sant 127 177 IPR001005 -
Adu09g02799 247 SMART sant 20 72 IPR001005 -
Adu09g02799 247 MobiDBLite consensus disorder prediction 104 118 - -
Adu09g02799 247 CDD SANT 24 70 IPR001005 -
Adu09g02799 247 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 20 233 - -
Adu09g02799 247 MobiDBLite consensus disorder prediction 84 130 - -
Adu09g02799 247 CDD SANT 130 175 IPR001005 -
Adu09g02799 247 Pfam Myb-like DNA-binding domain 22 66 IPR001005 -
Adu09g02799 247 Pfam Myb-like DNA-binding domain 130 175 IPR001005 -
Adu09g02799 247 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 126 178 IPR006447 GO:0003677
Adu09g02799 247 ProSiteProfiles Myb-like domain profile. 123 175 IPR001005 -
Adu09g02799 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 179 IPR017930 -
Adu09g02799 247 Gene3D - 18 83 - -
Adu09g02799 247 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 20 233 IPR043363 -
Adu09g02799 247 ProSiteProfiles SANT domain profile. 126 179 IPR017884 -
Adu09g02799 247 SUPERFAMILY Homeodomain-like 125 179 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02799 Adu-Chr9 115715584 115716691 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g02799 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02799 - - adu:107467340 431.795