Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02750 ATGAGTCCGTCGGGTAAGAACGTGGCAAACGCCGTCGGTGGCAAAACGGCAAGAGCGTGCGATAGCTGCATAACGAAGCGAGCACGGTGGTACTGTGCTGCCGATGATGCTTTCCTCTGCCAAGCATGTGACTCTTCTGTTCACTCCGCTAACCCACTCGCTCGCAGGCATCAGAGGCTGCGCTTGAAAGCCGCAACTTTGGACCCTCTCAACACTACCTCTACCTGTGCACCTACGTGGCACCATGGCTTCACAAAGAAAGCTCGCACGCCCCGAAACGGTGGTAAGACCAATCATTCGTCTTCTTCAACTCGTCCAACATCCAAGTCTTGTTGGAGCAGCCGCATCAACAACCAGCAGCCTTTTCATCTGGTGCCGGAAGAGGGCGAGGGCTCCGATGAAGTGAATTCCCATGAAGAGAACGAGGAGCAGCTTCTTTATAGGGTTCCTGTATTCGATCCCTTTGTAGCCGACCTATGCAGTCCTGCTGAGAATAATACCAAGAAGGAGAGCGAAGAGAGCAAGAGCTCCTTTGGTTCTCACTTGCATGGCTTTCTTCCATCGGAAGCTGAGCTTGCTGAGTTTGCGGCTGATGTGGAGAGCTTGTTGGGTAGGGGAATGGAGAACGAGTGCGTTGGGATGGAACACCTTGGTCTTATTGATAATAATAATAATAAGGTAGTGAAGGTGGAAATGGAACAGGAACAGGAACACATGGATGCTACCTGTAGTAGTTGCAAGCTCGAGGAGGGAGATAATGACATGATGATGATGGAGATTGGAAGAGAAACGGCGTTTCAGTTGAGCTTTGACTACGACGAATCTCATGAAACTGAAGAGATAGATAAGGAGAAGGTCAATGATGATGAAGATGCAATTAATAAGAAGAGGAAGATATTGCTGCAGCTAGATTACGAGGGAGTAATCAATGCGTGGGGTGGTAGCCATAAATCTCCATGGACTACAGGTCACAAACCAAACTTGGACCTCCATGATTGCTGGCCTCATACCATGGCAACAGGGGGAACAGAGTTTCATCATGGTTATGGTGAATTGATGATTGGATTGGGGTGTAACCCATCATCGGTAATATTGGGAGACGGGGGTAGAGAGGCAAGAGTGTCAAGGTACAGAGAGAAGCGCCGAACAAGGTTGTTCTCCAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGGCCCAGAATGAAAGGTAGATTCGTCAAGAGGGCTTCATTTGCCGCACCATTTCCGTTGATTGCTTAA 1272 0.4866 MSPSGKNVANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHQRLRLKAATLDPLNTTSTCAPTWHHGFTKKARTPRNGGKTNHSSSSTRPTSKSCWSSRINNQQPFHLVPEEGEGSDEVNSHEENEEQLLYRVPVFDPFVADLCSPAENNTKKESEESKSSFGSHLHGFLPSEAELAEFAADVESLLGRGMENECVGMEHLGLIDNNNNKVVKVEMEQEQEHMDATCSSCKLEEGDNDMMMMEIGRETAFQLSFDYDESHETEEIDKEKVNDDEDAINKKRKILLQLDYEGVINAWGGSHKSPWTTGHKPNLDLHDCWPHTMATGGTEFHHGYGELMIGLGCNPSSVILGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAAPFPLIA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02750 423 Pfam B-box zinc finger 17 59 IPR000315 GO:0008270
Adu09g02750 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 5 417 - -
Adu09g02750 423 MobiDBLite consensus disorder prediction 80 113 - -
Adu09g02750 423 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Adu09g02750 423 MobiDBLite consensus disorder prediction 94 113 - -
Adu09g02750 423 CDD Bbox1_BBX-like 19 62 - -
Adu09g02750 423 Pfam CCT motif 370 412 IPR010402 GO:0005515
Adu09g02750 423 SMART bboxneu5 15 62 IPR000315 GO:0008270
Adu09g02750 423 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 5 417 - -
Adu09g02750 423 ProSiteProfiles CCT domain profile. 370 412 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02750 Adu-Chr9 115107651 115109338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02750 6 412 C2C2-CO-like Transcription Factor Family AT1G25440 47.685 7.55e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Adu09g02750 CCT 1.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02750 - - cam:101499877 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02750 09 115107651 115109338 Adu09g02750 09 115107651 115109338 ECH