Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02648 ATGGCAATCCAACATCACAATGACCAACTAGAACAACAACATCACCACCAACACGCTGTCCTCGATGCCCTTTACTGCGACGAAGGAAAGTGGGAAGAAGAGTTCTCAGGAGAGAGTGATGTCACAACAAACCACGACCATGAAGAAGATGATGATGGTGTCAACTTCAACTTGAACTTCCATTCCCTTGACCCTCTGCTCTTGTTGGAGCAGGACATGTTCTGGGAAGACGAAGAGCTCAACACTCTCTTCTCCAAAGAGAAGCTTGACCACGAAGCCTATTATAACAATGGCGATGATGTCATGAAAGCATTGGATCCTTCTTCTTCTTCTTCTGTGTGTATGGCTCGCCGTGAAGCAGTTGAATGGATGCTTAAGGTGAATGCTCATTACGGGTTCTCAGCTCTGACGGCAACACTTGCCGTTACTTATCTGGATAGATTCCTCTTGAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAACTTGCCTCTGTCACTTGCATCTCTTTGGCTGCTAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGACCTTCAAGTTGAAGATGCAAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTTCTGATTCTGTCCACCTTGAATTGGAAGATGCACCCTGTGACCCCACTCTCATTTCTAGATCACATTATAAGGAGGTTGGGACTCAAAACACATCTTCACTGGCAGTTCCTCAAGCGTTGTGAGAATCTTCTTCTGTCTTTGCTATTGGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTATTGGCCACTGCAACAATGCTGAATGTAATAGGCCAGATTCATCACAGCACTGAGGGAGTGGAATACAAAAACCAGCTTCTTAGTGTTATCAACATGAACAAGGAGAAGGTAGATGAATGTTATAAAGTCATAGTGGAGGTGACAAATAATAATAATAATGGTGGGAGGGGGAAGAAGAGAAAGTATGAGGAAATCCCTGGTAGCCCAAGTGGCGTAATTGATGCAGTGTTCAGCTCTGATGATGGTTCCAACGATTCGTGGGAAGTGGTGGTGGGGTCATCACCATCACAAGAGGAGGCTCAGCCTCAGCCTCTCTTGAAGAACAAGAAACAACAATTGAAATTGTCATCACTTAACAGGGTCATTGTCGGAATTGTTGGCACCACCCCATAA 1191 0.4442 MAIQHHNDQLEQQHHHQHAVLDALYCDEGKWEEEFSGESDVTTNHDHEEDDDGVNFNLNFHSLDPLLLLEQDMFWEDEELNTLFSKEKLDHEAYYNNGDDVMKALDPSSSSSVCMARREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLASVTCISLAAKVEETQVPLLLDLQVEDAKYVFEAKTIQRMELLILSTLNWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCENLLLSLLLDSRFVGCLPSVLATATMLNVIGQIHHSTEGVEYKNQLLSVINMNKEKVDECYKVIVEVTNNNNNGGRGKKRKYEEIPGSPSGVIDAVFSSDDGSNDSWEVVVGSSPSQEEAQPQPLLKNKKQQLKLSSLNRVIVGIVGTTP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02648 396 Gene3D - 115 217 - -
Adu09g02648 396 SUPERFAMILY Cyclin-like 102 217 IPR036915 -
Adu09g02648 396 Pfam Cyclin, N-terminal domain 115 216 IPR006671 -
Adu09g02648 396 PANTHER CYCLIN D3.1 PROTEIN 51 366 - -
Adu09g02648 396 CDD CYCLIN 117 209 IPR013763 -
Adu09g02648 396 PANTHER CYCLINS 51 366 IPR039361 -
Adu09g02648 396 SUPERFAMILY Cyclin-like 201 315 IPR036915 -
Adu09g02648 396 SMART Cyclin_C_2 219 347 IPR004367 -
Adu09g02648 396 SMART cyclin_7 122 210 IPR013763 -
Adu09g02648 396 Pfam Cyclin, C-terminal domain 219 328 IPR004367 -
Adu09g02648 396 ProSitePatterns Cyclins signature. 117 148 IPR006671 -
Adu09g02648 396 Gene3D - 218 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02648 Adu-Chr9 113998260 114000183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02648 1 313 Core Cell Cycle Gene Families AT4G34160 54.313 7.35e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02648 K14505 - gmx:547740 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02648 09 113998260 114000183 Adu09g02648 09 113998260 114000183 ECH
Adu08g01021 08 18365159 18366693 Adu09g02648 09 113998260 114000183 ECH
Adu06g03152 06 109741558 109743846 Adu09g02648 09 113998260 114000183 ECH
Adu05g00636 05 7195143 7197012 Adu09g02648 09 113998260 114000183 PCT