Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02619 ATGCAGGGCGAACTAGAAGAATTTACAAGCCCCAACAGAAGTGCCTCTAGAAAGATGCAAACACCGGATGCTGGAACAGAACAATGTCATTTGTCAGAGAAAACATCTCAGGTGGGTTCCGAATGTTTAGACAACAAGCAAGGTGTGCCTGGCAATGTCAATGTGTTAACCAGCTCTGTTATTGATGAAAACTCAAACCAAGGTTCTGGAAAAATTATTAGGGGTGCTGTTATTGCACTGCCTGCACAACGCCAGCGTGATTTGAAAAAGAGTTGTCAAACTGCAGAAGGTTCATGCTCTCATCGGAGTACCTCAGAACAAGACCCCTCTCATTTGTCTAATGACAAATCAGAGATCAAATGTGAGCCTTTTTCTCAGAATGGCCAAAATGTGTCCGTGGAAATAAATAATCCTGTAACTGGCTCTCTTGTTGAGAACCAAATGCTATCTGTTCCAACACAAGTGAACACCACTTCTGCAAATGGACTACAGGATCCAGCTCCAGCATCTGTAGATGTGAAAAATACTGGTTTGAAATGTTCAAAAAGAAACTCTACAGCCACAACATCTATGCAGTTGAGCTGCAAGGGTAAAAAAAGCTCAAAATTATTAAAGAAGAAGTATATGCTAAGGTCATTAGGAAGCAGTGATAGAGCTTTGCGATCAAGGACACGCGAAAAACCTAAACCACCTGAGTCAAATAGCAATTTGGTTGATGCTAATAATGATGGCGTGAAGAATAAAAGGGGGAAGAAGAAGAACAAAAAGAGAGACGGGGAAGGAGTTATTGATGAATTTTCTAGAATAAGAGCTCGCTTAAGATATTTATTGAAACGAGTTAGCTATGAGCAGAACTTGATTGATGCTTATTCTAGTGAGGGCTGGAAAGGATACAGTTTGGAAAAGTTAAAGCCTGAAAAGGAGCTTCAACGGGCTAAGACTGAAATACTTCGACGTAAATTGAAAATGAGGGATCTCTTTCGATATTTGGATTCATTGTGTGCTGAAGGAAGGCTTCCTGAATCTGTGTTTGATTCTGAAGGAGAGATTGACAGTGAGGATATATTCTGTGCAAAATGTAGTTCCAAAGAGTTGAGCACAAACAATGATATAATTCTCTGTGACGGTGCTTGTGAACGTGGATTTCACCAGCTTTGTGTGGATCCTCCTTTGTTAACTGAAAACAGTAATCTCTTGTTTACTGCATTGATTGGTCACTTTGTACTTCCAAGTTGTCTATCATTTATTTATTTGCTGTGGCTTACAGTTCCACCTGGCGATGAGGGTTGGCTATGCCCGGGATGTGATTGCAAAGATGACTGTATTGAACTTGTTAATGACTCCTTAGGAACACGTCTCTCTCTTGAGGATAGCTGGGAGAGGGTTTTTCCAGAAGCAGCTGCAGTTGATGCATTCAATGTGGATCACAACTCAGGACTTCCTTCTGATGATTCTGATGATGATGATTATGATCCTGATGTTAAAGAAGATGTGGAGGCTGAAGGGGGTGAATCAAGTTCTGATGAATCTGAGTATGCTTCTGCTTCTGAGAAATTGGAGGATTCAGGCCATGAGGATCAGTACATGGGCCTTCCTTCTGAAGATTCTGAGGATGATGATTATAATCCTGATGCTCCAGATCAAGACATGAAAGTTGCAGAGGAAAGTTCGAGCTCTGATTTCACATCTGATTCTGAGGATCTTGCTGCTACAATTAATGATAATATGCCCCCAGGACACGGTGAAGATATCACATCTGCATCATTGGATGATGCAAAGAAGTTTAAAGGATCCAGCAAAACAAGTAAAGTCGGTAAGAAGCCATCTATAACTGATGAATTGTCATCTTTACTAGAGGCAGATCCTGGCCAAGAGAGTTACACTCCTGTTTCGGGGAAAAGAAATGTGGAAAGGTTGGACTACAAAAAGCTCTTGTATGTATACAAGAGTGGATGCATAGAGTCAAAGTTATTTCTTGTCACATTCTTTACTACCCCAACTAGGAAGAAGAATGTCACTGGTAAATTGACTCCAATGTCACCAAATAGAAAAGCCTCAAATAATTCTACACATACTCTGAGAAGTGACGGTAAAGCTGAAAAAACAAATAACTCAGCTGCTAAATCACTTGAAGGCTCTGGAAAATCAGGTTCCGGGGAGAAAAAACTAAGATCTTCAACATACAACAGACTTGGAGATGTTGCAATTGAGAGACTTTACAAATCTTTCAAAGAGAATCAGTATCCAGATCGGACCACAAAAGAAAGCTTGGCACAAGAAACAGGACTCACACTTCAGCAGGTAAGTAAATGGTTTGACAACACCAGATGGAGCTTTAGGCATTCATCCCATAAGGAACCCAGGACAGGTGAAAATGCTTTGGCACAGACCACTGATAACATATCTGAAAATGAGGTGGCACCTGCTGGAGAGAACAGGGACAGTGAATTATTCCCCCAAGATGTCACCGGAGAAAACTCAAAAACCCCAAGCTCTAAAAAGAGGAAGGGTATGTCTGAACCCCTGGCATCTGAGTCTCCTCAGAATGCTGATAAAGCATCAAGTCATAAAATGAAGACAAGGAAAAGAAAATGA 2595 0.4096 MQGELEEFTSPNRSASRKMQTPDAGTEQCHLSEKTSQVGSECLDNKQGVPGNVNVLTSSVIDENSNQGSGKIIRGAVIALPAQRQRDLKKSCQTAEGSCSHRSTSEQDPSHLSNDKSEIKCEPFSQNGQNVSVEINNPVTGSLVENQMLSVPTQVNTTSANGLQDPAPASVDVKNTGLKCSKRNSTATTSMQLSCKGKKSSKLLKKKYMLRSLGSSDRALRSRTREKPKPPESNSNLVDANNDGVKNKRGKKKNKKRDGEGVIDEFSRIRARLRYLLKRVSYEQNLIDAYSSEGWKGYSLEKLKPEKELQRAKTEILRRKLKMRDLFRYLDSLCAEGRLPESVFDSEGEIDSEDIFCAKCSSKELSTNNDIILCDGACERGFHQLCVDPPLLTENSNLLFTALIGHFVLPSCLSFIYLLWLTVPPGDEGWLCPGCDCKDDCIELVNDSLGTRLSLEDSWERVFPEAAAVDAFNVDHNSGLPSDDSDDDDYDPDVKEDVEAEGGESSSDESEYASASEKLEDSGHEDQYMGLPSEDSEDDDYNPDAPDQDMKVAEESSSSDFTSDSEDLAATINDNMPPGHGEDITSASLDDAKKFKGSSKTSKVGKKPSITDELSSLLEADPGQESYTPVSGKRNVERLDYKKLLYVYKSGCIESKLFLVTFFTTPTRKKNVTGKLTPMSPNRKASNNSTHTLRSDGKAEKTNNSAAKSLEGSGKSGSGEKKLRSSTYNRLGDVAIERLYKSFKENQYPDRTTKESLAQETGLTLQQVSKWFDNTRWSFRHSSHKEPRTGENALAQTTDNISENEVAPAGENRDSELFPQDVTGENSKTPSSKKRKGMSEPLASESPQNADKASSHKMKTRKRK 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02619 864 MobiDBLite consensus disorder prediction 89 125 - -
Adu09g02619 864 MobiDBLite consensus disorder prediction 214 260 - -
Adu09g02619 864 MobiDBLite consensus disorder prediction 218 232 - -
Adu09g02619 864 MobiDBLite consensus disorder prediction 670 725 - -
Adu09g02619 864 ProSiteProfiles Zinc finger PHD-type profile. 354 438 IPR019787 -
Adu09g02619 864 SMART HOX_1 724 786 IPR001356 GO:0003677
Adu09g02619 864 SMART PHD_3 356 436 IPR001965 -
Adu09g02619 864 MobiDBLite consensus disorder prediction 482 506 - -
Adu09g02619 864 MobiDBLite consensus disorder prediction 555 570 - -
Adu09g02619 864 MobiDBLite consensus disorder prediction 511 531 - -
Adu09g02619 864 ProSiteProfiles 'Homeobox' domain profile. 722 782 IPR001356 GO:0003677
Adu09g02619 864 MobiDBLite consensus disorder prediction 92 107 - -
Adu09g02619 864 MobiDBLite consensus disorder prediction 1 36 - -
Adu09g02619 864 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 142 836 - -
Adu09g02619 864 CDD PHD_PRHA_like 356 435 IPR045876 -
Adu09g02619 864 MobiDBLite consensus disorder prediction 789 805 - -
Adu09g02619 864 SUPERFAMILY Homeodomain-like 728 784 IPR009057 -
Adu09g02619 864 MobiDBLite consensus disorder prediction 474 583 - -
Adu09g02619 864 SUPERFAMILY FYVE/PHD zinc finger 346 392 IPR011011 -
Adu09g02619 864 CDD homeodomain 730 783 IPR001356 GO:0003677
Adu09g02619 864 MobiDBLite consensus disorder prediction 781 864 - -
Adu09g02619 864 ProSitePatterns Zinc finger PHD-type signature. 357 435 IPR019786 -
Adu09g02619 864 MobiDBLite consensus disorder prediction 670 712 - -
Adu09g02619 864 Pfam Homeodomain 735 778 IPR001356 GO:0003677
Adu09g02619 864 PANTHER HOMEOBOX PROTEIN HAT3.1 142 836 - -
Adu09g02619 864 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 399 IPR013083 -
Adu09g02619 864 Gene3D - 725 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02619 Adu-Chr9 113653361 113658356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02619 213 836 Homeobox Transcription Factor Family AT3G19510 41.896 1.80e-120 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Adu09g02619 Homeodomain 7.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02619 - - aip:107617775 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02619 09 113653361 113658356 Adu09g02619 09 113653361 113658356 ECH