Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02606 ATGGTTGATGCTTTGAATGAAGTGCAACGCAGCGGCAATGCATTTGTTATTCCTGCTAAGAGGGATGCTGTATTGTTTGAAGGAGACAAAGATTTAGAGCCACACAATGGGATTGAATTTGAATCTCATGAAGCAGCATATTCATTTTATCAGGAATATGCCAAATCAATGGGATTCACAACTTCGATCAAGAATAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAATTTGCGTGCTCTCGGTATGGCGTTACACCTGAGTCTGACAGCGGGAGCAGTCGAAGACCCAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAAAGAAGGTCAGAAGGGAAGTGGATCATTCATGAATTTATAAAGGAACACAACCATGAACTCTTACCGGCTTTGGCATATCATTTTCGTATTCATAGGAATGTCAAGTTAGCTGAAAAGAATAATATTGATATTTTGCATGCTGTTAGTGAACGAACCAGAAAAATGTATGTTGAGATGTCTAGGCAGTCTGGTGGGTGTCGAAATACTGGATCCCTCTTGGGGGACACAAATGATCAGTTTGACAGAGGCCGACAGCTGGCTTTGGATGAGGGAGATGGCCATTTCATATTGGAGTATTTTAAGCGCATCCAAAAGGAGAACCCCTATTTCTTCTATGCTATCGATTTAAATGAAGAGCAACGTTTAAGGAATCTATTCTGGGTTGATGCAAAAAGTAGGAACGATTATCTTAGCTTTAATGATGCAGTCTCATTTGATATCACTTACATCAAAAGCAATGATAAGTTACCATTTGCTCCTTTCATTGGGGTGAATCATCACTCTCAACCTATATTGCTTGGGTGTGCTTTGCTTGCAGATGAGACCAAGCCAACATTTGTCTGGTTAATGAAGACATGGCTTAGAGCGATGGGAGGGCAAGCTCCCAAAATTATAATTACTGATCAAGACAAAGCCTTGAAGACAGCAATTGAAGAAGTCTTCCCAAATGCGAGACATTGCTTTGCCCTTTGGCACATACTTGAAAGGATACCTGAAAATCTATCTTCTGTGATCAAGCAGTATAAGAACTTCTTGCGAAAGTTAAACAAGTGCATTTTTAAGTCATGGACTGATGAAGAGTTTGACATGAGATGGTGGAAAATGGTCACTAGATTTGAACTTCAAGATGATCTATGGTGTCAATCACTGTATGAAGATCGGAAAAAGTGGGTGCCAACTTATATGGGGGATACTTTTTTAGCTGGAATGTCTACACCTCAGCGTTCTGAAAGTATGAACTCTTTCTTTGACAAATACATACACAAGAAAATCACCCTTAAAGAGTTTGTGAAACAATATGGGTTAATCCTTCAGAATAGGTATGAAGAGGAGGCAATTGCAGATTTTGATACATTGCACAAGCAGCCAGCACTCAGATCTCCTTCACCTTGGGAAAAACAAATGTCAACGGTTTATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGAACAGAGCCTGGTGATGGACCAATTACAAAGTTTATAGTTCAAGATTATGAGAAAGATGAAGAGTTTTTGGTTACATGGAATGAATTGAGCTCAGATGTCTCTTGTTTCTGTCGATTGTTTGAATATAAAGGTATCCTTTGCAGGCATGCGTTAAGCGTTCTCCAACGTTGTGGTTGTTCAAGTGTTCCACCTCATTATGTTATGAAAAGATGGACGAAAGATGCCAAAAGTAGGGAACCCATGGCAGATAGGACTCAGAAAGTACAAACAAGGGTGCAGCGTTATAATGATTTGTGTAAACGTGCTATTGATTTGAGTGAAGAAGGATCACTGTCTGAAGAGAGCTATAGTGTTGTTTTCCGTACACTTGTTGATACCCTGAAGAACTGTGTATATGTAAATAATTCTAACAACAATGGTGCAGAAACTAGCAACAATTCTTTTTCCGTTCATGAAGCAGAAGAAAATCAGGGCACCCTTCAATTGAAAGCAAGTAAGAAGAGGGGCACTGCTAGGAAAAGAAAGGTGCAGTCAGATCAGGAAGTTATGCTTGTTGACACACAAGATAGCCTGCAGCAAATGGATAATCTAAGCTCAGACACAATAACACTCAATGGATACTATGGTACCCAGCAGAGCATGCAAGGACTGCAGGTACGGTTGAACTTAATGGAGCCGCCTCATGATGGTTACTATGTCAATCAACAGAATATGCAAGGCTTGGGTCCCTTGAATTCTATGGCTCCTAGCCATGATGGGTTTTTTGGAACTCAGCAAAGCATTCATGGGCTGGGAGGGCAACTGGAATTCCGCCCTGCTACTTCTTTTGGATATAGCCTTCAGGATGAGCCTGATCCTCTGTTCCATGGCAGTAGTTCTAGAAATACTTAG 2430 0.4045 MVDALNEVQRSGNAFVIPAKRDAVLFEGDKDLEPHNGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRRSEGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCRNTGSLLGDTNDQFDRGRQLALDEGDGHFILEYFKRIQKENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYLSFNDAVSFDITYIKSNDKLPFAPFIGVNHHSQPILLGCALLADETKPTFVWLMKTWLRAMGGQAPKIIITDQDKALKTAIEEVFPNARHCFALWHILERIPENLSSVIKQYKNFLRKLNKCIFKSWTDEEFDMRWWKMVTRFELQDDLWCQSLYEDRKKWVPTYMGDTFLAGMSTPQRSESMNSFFDKYIHKKITLKEFVKQYGLILQNRYEEEAIADFDTLHKQPALRSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSRTEPGDGPITKFIVQDYEKDEEFLVTWNELSSDVSCFCRLFEYKGILCRHALSVLQRCGCSSVPPHYVMKRWTKDAKSREPMADRTQKVQTRVQRYNDLCKRAIDLSEEGSLSEESYSVVFRTLVDTLKNCVYVNNSNNNGAETSNNSFSVHEAEENQGTLQLKASKKRGTARKRKVQSDQEVMLVDTQDSLQQMDNLSSDTITLNGYYGTQQSMQGLQVRLNLMEPPHDGYYVNQQNMQGLGPLNSMAPSHDGFFGTQQSIHGLGGQLEFRPATSFGYSLQDEPDPLFHGSSSRNT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02606 809 SMART 26again6 546 573 IPR006564 GO:0008270
Adu09g02606 809 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 20 724 - -
Adu09g02606 809 Pfam MULE transposase domain 256 348 IPR018289 -
Adu09g02606 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 724 IPR031052 GO:0006355
Adu09g02606 809 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Adu09g02606 809 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Adu09g02606 809 Pfam SWIM zinc finger 537 570 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02606 Adu-Chr9 113527781 113532275 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g02606 MULE 6.8e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02606 - - lang:109346405 1427.15