Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02597 ATGGCAACTGCAGTTACGCCGGCGTCGCTCGGCCGAGAGCTGTCGGATCCTCCGTCCGACGGAATCTCCAACCTCCGCTTCTCCAACCACAGCGATCTCCTCCTCGTCTCCTCTTGGGATAAGAGCGTGCGCTTGTACGATGCCAGCGCCAATGTGCTCAAGGCTGAGTTCATGCACGGCGGCCCCGTTCTCGATTGCTGCTTTCACGATGACTCTTCCGGCTTCAGCGCTGCCGGCGACAACACCGTCAGGCGCCTCCTCTTCGCCTCTAACAAGGACGACATCCTCGGAAAGCAAGCTGTCATACTTGTATCTGAAATTTTCGACATGTTTTCGTTCATTTTAATCATTGTGTTTCATTCTTTTCTTTTCTTTTCCTTTTTCACAATAGGGCAATTGATCACTGGTAGTTGGGATAAAACCCTGAAGTGCTGGGACCCTAGGGGTGCAAGTGGACAGGAGCGCACTCTGGTTGGGACATATCCACAACCTGAGCGCGTTTACTCCCTATCTCTTGTTGGACATCGGCTAGTTGTAGCAACGGCTGGAAGGCATGTCAATATTTATGATTTGAGGAACATGTCTCAACCCGAGCAACGGAGAGAATCTTCATTGAAATATCAAACTAGATGTGTGCGCTGCTACCCTAATGGAACAGGATATGCACTTAGTTCTGTGGAAGGACGGGTTGCAATGGAATTCTTTGACCTCTCCGATGCTAGCCAAGCAAAAAAATATGCCTTTAAGTGCCACCGAAAATCAGAAGCTGGAAGGGACATCGTCTATCCTGTAAATGCTATTGCATTCCATCCCGTATATGGTACGTTTGCCACAGGAGGCTGTGATGGTTATGTTAATGTTTGGGATGGAAACAACAAGAAGAGGCTATACCAGTACTCAAAGTATCCAACAAGCATTGCTGCACTTTCATTTAGCAGAGATGGGCGGCTCCTGGCTGTTGCATCAAGTTATACATACGAAGAGGGGCTTAAACCCCATGATAAAGATGCCATATACATCCGCGGTGTAAACGAGATTGAGGTCAAGCCAAAACCCAAGGTCCTTCCTCCAGCTTGA 1077 0.4865 MATAVTPASLGRELSDPPSDGISNLRFSNHSDLLLVSSWDKSVRLYDASANVLKAEFMHGGPVLDCCFHDDSSGFSAAGDNTVRRLLFASNKDDILGKQAVILVSEIFDMFSFILIIVFHSFLFFSFFTIGQLITGSWDKTLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSDASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPVYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTYEEGLKPHDKDAIYIRGVNEIEVKPKPKVLPPA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02597 358 SUPERFAMILY WD40 repeat-like 17 323 IPR036322 GO:0005515
Adu09g02597 358 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.2 8 354 - -
Adu09g02597 358 Gene3D - 11 354 IPR015943 GO:0005515
Adu09g02597 358 PANTHER MRNA EXPORT FACTOR AND BUB3 8 354 - -
Adu09g02597 358 SMART WD40_4 7 47 IPR001680 GO:0005515
Adu09g02597 358 SMART WD40_4 241 289 IPR001680 GO:0005515
Adu09g02597 358 SMART WD40_4 154 190 IPR001680 GO:0005515
Adu09g02597 358 SMART WD40_4 50 87 IPR001680 GO:0005515
Adu09g02597 358 SMART WD40_4 112 146 IPR001680 GO:0005515
Adu09g02597 358 ProSiteProfiles Trp-Asp (WD) repeats profile. 264 298 IPR001680 GO:0005515
Adu09g02597 358 Pfam WD domain, G-beta repeat 20 47 IPR001680 GO:0005515
Adu09g02597 358 Pfam WD domain, G-beta repeat 131 146 IPR001680 GO:0005515
Adu09g02597 358 Pfam WD domain, G-beta repeat 248 289 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02597 Adu-Chr9 113450206 113452708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02597 133 334 U-box Gene Family AT2G33340 25.366 1.87e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02597 K02180 - mnt:21387210 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02597 09 113450206 113452708 Adu09g02597 09 113450206 113452708 ECH