Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02595 ATGGAACCAGCTCAGTTGATTTCTGAAGAATGGGGTTCTCTTAGTGGACTATACACAGCTGAGGAAGCTGAATTCATGACTCAGCTTCTTGCTGGTAACTATTCTGTCTCAGAGAAGCATTATTCTAGTGTTGCCATGCCACCATCTTCTGCATTTTGGCCTTGCCATGAATCCACAAAAGTGAGCTTCAAAGGCATCAATGGCAATTCCTATTTGCCTCCTTCACATATTGAAAATGCTAACTATCTATGCTTCTCCCAAGGGAGTAGCTCCAGTACTGAGAATGGGAATATCTATTCCTATGATACCACAACAAATTTCGACTCCATGTCCACCGATAATTGTTTAGAAGGTGCCAAGTTTAGTCCACAGAGTAATGATAACTCGAGGGCGCAGATAAGTGGAATCATTGATGATGATGCTAAGATAGAGTGTGAAAGAATGGTTTTTGAACCTGCAGAGGACTTGGAGAACCCAACCAAAAGGCTTAGGAGTTCATCTGAGGTCCCAAGAAACATGAGGAATGTTAAATCAAGGAAGGAGAATCCACTTCCTTCTTCTTACACAAGCAACAGTGAAGAGGATAAAGGCCCTGCAGCTCCCAAAAATAGAAGAAGTAGCAGTGGTGCTGCCACAGATCCACAGAGCCTATATGCAAGAAAAAGAAGAGAAAGGATAAATGAAAGGTTGAGAATACTACAAACACTTGTCCCCAATGGAACTAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTCCATTATGTGAAGTTCTTACAACTCCAAATTAAGCTTCTAAGCTCTGATGATTTATGGATGTATGCTCCAATCGCTTACAATGGAATTAATATTGGACTAGACCTCTCTATTACTCCTCCAACTAAATGGGAAAGCCCTTTTCTACATTGA 909 0.4147 MEPAQLISEEWGSLSGLYTAEEAEFMTQLLAGNYSVSEKHYSSVAMPPSSAFWPCHESTKVSFKGINGNSYLPPSHIENANYLCFSQGSSSSTENGNIYSYDTTTNFDSMSTDNCLEGAKFSPQSNDNSRAQISGIIDDDAKIECERMVFEPAEDLENPTKRLRSSSEVPRNMRNVKSRKENPLPSSYTSNSEEDKGPAAPKNRRSSSGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGINIGLDLSITPPTKWESPFLH 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02595 302 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 210 259 IPR011598 GO:0046983
Adu09g02595 302 PANTHER TRANSCRIPTION FACTOR BHLH54 189 292 - -
Adu09g02595 302 PANTHER TRANSCRIPTION FACTOR BHLH54 7 206 - -
Adu09g02595 302 SMART finulus 216 265 IPR011598 GO:0046983
Adu09g02595 302 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 189 292 - -
Adu09g02595 302 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 206 - -
Adu09g02595 302 CDD bHLH_AtIND_like 211 273 - -
Adu09g02595 302 Pfam Helix-loop-helix DNA-binding domain 220 260 IPR011598 GO:0046983
Adu09g02595 302 MobiDBLite consensus disorder prediction 179 196 - -
Adu09g02595 302 Gene3D - 213 268 IPR036638 GO:0046983
Adu09g02595 302 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 275 IPR036638 GO:0046983
Adu09g02595 302 MobiDBLite consensus disorder prediction 154 178 - -
Adu09g02595 302 MobiDBLite consensus disorder prediction 154 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02595 Adu-Chr9 113441537 113442740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02595 189 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 81.000 1.85e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu09g02595 HLH 6.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02595 - - adu:107467178 602.438