Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02563 ATGGCACCTTCAAGTTCAAGAGTGATTTCTCAACTTCTTTGTCTTCTTTTTACGCTTATTTCTCATACTACAGCTCAGCCAAGCTTCCTGTACCATTTTTGCATGAATGATAAAGGAAACTACACAGAAAACAGTGCCTACCACACCAACCTCAACACTCTTTTGTCCACTTTGTCTTCCAATACACAAATTGATTATGGCTTCTACAACTTCTCTCAGGGACAAGGCTCTGACAAAGTTAATGCAATTGGGATGTGTAGAGGAGATGTTAAGCCGGAATCTTGCCGCAGTTGTCTCAATGATTCCAGAGTCCTTCTGATGCATCGCTGTCCGAATCAGAAGGAGGCTATAGGTTGGTATGACAACTGCATGTTGCGCTATTCGAACCGGTCCATATTTGACACCATGGAACCTGACCCTACCTACCTTCTGTGGGTTGGAATCAATGCAACTGATATGAATCAATTCATTCAAGTGCTTAGGAACTTGCTGGAAAGCCTTAGAACCAATGCTTCATCAGGTGATTCCCTTAAAAAGTATGCTGCAGGAAGCGCGGCCGGACCAAGCTTCCAGACTATATTTGCTCTTCTGCAATGCACACCTGATTTATCAGAGCAAGAATGTGATGATTGCTTGGTCAGGGCCATCTCAAATATTAATGATCGTTGTTATGGCTTAACAAAGTGCAGAATTGGAAAACCAAGCTGCAATCTTAGATTTGATACTTCACCTTTCTATGACTCTACGGCTGATGCTTCTCCGTCTTCGCCATCAAAAGAATCTCCTCCTCCTCCAGTCACCAATACTAATGCCACTTCTACCAAAGGAAAGAGCAATTCAACAGGTATTGTCATTGCAGTGGTAGTGCCGATTTTCGTCGTTTTAGTACTGCTCATCTCTGTTTGCATCTTCATAAGAGCAAGGAAGCGCAAGAGAAGTTTTCACAATCACAATGACACTGAAGTTGACAATGAAATTGAACCTATTGATTCATTGCAATTCAACTTTGACACCATTAGAACGGCTACAAATAACTTTTCAGAAGAAAATAAGCTAGGACGAGGAGGATTTGGACCTGTTTACAAGGGTAAGCTTTCTAATGGAAGAGAAATTGCAGTCAAAAGGCTGTCAATGAATTCAGGACAAGGAGATACAGAATTTAAGAATGAAGTGCTGTTAGTGGCCAAGCTTCAGCACCGCAATTTAGTTAGGCTACTTGGTTTTTGCTTGGAAAGAAAAGAAAGATTACTGGTTTATGAGTTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCCAATCAAACGCGCTCATCTGGATTGGGAAAAGAGATACAAAATCATTGGAggcattgctaaaggccttctttatcttcacgaggattcgcgtctgcgtattattcatcgtgaccttaaagcaagtaacatccttttagacgaagaaatgaatccgaaaatatcagattttggcatggcaagaTTGTTTCTTGTGGATCAAACTCAAGGGAACACAAATAGAGTTGTTGGAACATATGGATACATGGCACCTGAGTATATAATGCAAGGACAATTCTCTGTGAAATCAGATGTCTTTAGTTTTGGCGTAATGGTTCTAGAGATAGTAAGTGGCCAGAAAAATAGTGGCTTCCACAAGGGAGAGGATGTGGAGGACCTAATAAGCTTTGCATGGAAAAATTGGAGGGACGGAACAGCATCAAACATTATAGATCACACAATGAATAATGGTTCAAGAAATGAAATACTGAGATGTATCCACATTGGTTTACTGTGTGTTCAGGAAAATTTAGCTGATAGACCAAACATGGCTTCTATTGTGCTCATGCTTAACAGCCATTCTCTCACTCTTCCAGTGCCATCAAAGCCTCCATTTCTTGTGGACAGCAGAGGTTTATCAACTATTCCATCATGGGAGTATAGTTCAAGGGAAACTGATTGA 1959 0.3783 MAPSSSRVISQLLCLLFTLISHTTAQPSFLYHFCMNDKGNYTENSAYHTNLNTLLSTLSSNTQIDYGFYNFSQGQGSDKVNAIGMCRGDVKPESCRSCLNDSRVLLMHRCPNQKEAIGWYDNCMLRYSNRSIFDTMEPDPTYLLWVGINATDMNQFIQVLRNLLESLRTNASSGDSLKKYAAGSAAGPSFQTIFALLQCTPDLSEQECDDCLVRAISNINDRCYGLTKCRIGKPSCNLRFDTSPFYDSTADASPSSPSKESPPPPVTNTNATSTKGKSNSTGIVIAVVVPIFVVLVLLISVCIFIRARKRKRSFHNHNDTEVDNEIEPIDSLQFNFDTIRTATNNFSEENKLGRGGFGPVYKGKLSNGREIAVKRLSMNSGQGDTEFKNEVLLVAKLQHRNLVRLLGFCLERKERLLVYEFVPNKSLDYFIFDPIKRAHLDWEKRYKIIGGIAKGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFLVDQTQGNTNRVVGTYGYMAPEYIMQGQFSVKSDVFSFGVMVLEIVSGQKNSGFHKGEDVEDLISFAWKNWRDGTASNIIDHTMNNGSRNEILRCIHIGLLCVQENLADRPNMASIVLMLNSHSLTLPVPSKPPFLVDSRGLSTIPSWEYSSRETD 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02563 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Adu09g02563 652 Gene3D - 25 131 IPR038408 -
Adu09g02563 652 Gene3D - 142 245 IPR038408 -
Adu09g02563 652 Pfam Protein tyrosine and serine/threonine kinase 349 614 IPR001245 GO:0004672|GO:0006468
Adu09g02563 652 Pfam TMEM154 protein family 259 320 IPR028064 -
Adu09g02563 652 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Adu09g02563 652 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 647 - -
Adu09g02563 652 SUPERFAMILY Protein kinase-like (PK-like) 334 638 IPR011009 -
Adu09g02563 652 Gene3D Phosphorylase Kinase; domain 1 306 421 - -
Adu09g02563 652 SMART serkin_6 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02563 652 CDD STKc_IRAK 352 617 - -
Adu09g02563 652 MobiDBLite consensus disorder prediction 248 277 - -
Adu09g02563 652 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Adu09g02563 652 Pfam Salt stress response/antifungal 151 242 IPR002902 -
Adu09g02563 652 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 647 - -
Adu09g02563 652 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Adu09g02563 652 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02563 652 Gene3D Transferase(Phosphotransferase) domain 1 422 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02563 Adu-Chr9 113161994 113164925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02563 7 650 Receptor kinase-like Gene Family AT4G21410 50.530 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu09g02563 PK_Tyr_Ser-Thr 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02563 - - gmx:102662291 996.882