Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02560 ATGTTCGACACCAAAAATATCACACTACCATTCTTACTTAGAACCCTAACACTAACAGTACTTTTGACTTCAGAACATGCCTCAGCTTCTGTTTTCGATTCAGTCAACTGCACAACCAACTCCACCTTCGCTCCAAACAGCACCTTCGACGTCAACCTCAGCACACTCTTCTCATATCTTACTTCCAACGTCACCAACGGCAACAATCTCAGGTTCTTCAACGCAACTGTAGGCTCTCACGGTTCAGACGCCGCCGTCTACGGCCTCTTCATGTGCCGTGGTGACGTGCCACTTGCACTGTGCCGAGAGTGCGTCGGTTTCGCAGCGCAGAACATAGCCTCGTCGTGTCCCTCTGCTAACGAGGCTGTCATCTGGTACAACGAGTGCTTGTTACGCTACTCCAACAGATTCTTCTTCTCCACCATGGACGAATGGCCAAGGTACCAGATCAAGATCCCGTTGGGGGACCCTGTGGTTTTGCACAGCAAAGGTTTCTACAGTGCTTTAGGGTCCATATTCAATGGGATTGGAAATGAAGCAGCCTTGGCTCTTGGCGGTTCTGATAACAAGTATGCAGTGAAACAAGCTGCCGCCACGGCCACCACCACAGTGTACGGTCTTGCTCAGTGCACGCCGGACCTCTCAGCCGCTGACTGCAAGCGGTGTATCGTGGACGCGACGGCTGAATTTCCAAGGACTTGCTGCGGCGGGAGCATAGGGGGAAGTGTTATGTTTCCAAGTTGCATTGTTAGGTATGAAACGTATCCGTTTTATCAGCATTCAGGTACCTCCGGGACATTAACAACAACTAATAAGGGAGGAGGAAATAGCAGAACACAAGTGATTGCTATGGTTGCAGTTGTGGTTGTGATTTTGGTGATGGTTTTATGCTTTGGCTACTTTTACCTTCGAAGAAAACTGAGGAAGAGACGCAAGACTGGTCTCAGAATCAGAAAAAACTGTAATTCCATTAGGCCTGATATGAGTGCCTCAGAGTCTTTGGAATTTGATTTGGATACAATTCAATTCGCAACAAACAATTTTTCTCAAGGGAGCAGGATAGGAAAAGGAGGGTATGGAGAAGTCTACAAGGGAATTCTTCCAAGCGGAGAAGAAATAGCAGTGAAGAGGCTCTCAAGAAATTCGGGACAAGGGGCGGAGGAGTTCAAGAATGAAGTGTTGTTGATAGCTAAACTTCAGCACAGGAATTTGGTGAGGTTAATCGGATTCTGCCTCGAAGATCAAGAGAGTATACTTATCTATGAATATGTACCTAACAAGAGCCTTGATCACTTCCTATTTGATCCCTCCAAGCGAAGAGAATTAACTTGGTCGCAGCGTTATAAAATCATAAAGGGAATTGTTCGAGGAATTCTTTATCTTCATGAAGATTCTCGTCTCATGATAATACATCGAGACCTCAAACCAAGCAATGTTCTACTAGATAATCAAATGAATCCCAAAATTTCTGACTTTGGAATGGCGAGGATAGTAGATACAGATCACATCCAAGGATGTACTAACAGAGTAGTGGGCACATATGGTTATATGTCTCCGGAATATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTCATGGTTCTTGAGATTATAAGTGGAAAGAAGAATTCGTCTTCTTTTGATTCATGTCGTATTGACGACCTCTTGAGTTATGCATGGAAACTGTGGAATAGTGATGAATCAGTATTTCAATTGCTGGATCCAGTTCTGCAAGAATCTTATAATCCAAATGAAGTTGAAAGATGTATTCAGATTGGATTATTGTGTGTACAAGAAAATCCAGATGAGAGGCCTACAATGGGGACCATAGCTTCATATCTTACAAATGATTCAGTTGAAATGCCATATCCTCAGGAACCAGCATTTTTCATGAAAGGAAGGACAAGAAGGCATGCATCTGGACATGAATCATATTCATCAGGTCACACCACCAAATATTCTTTCTCATCCTCTGTAAATGACATGCCTACAACTGCTTTCTTCCCTCGATAG 2031 0.4372 MFDTKNITLPFLLRTLTLTVLLTSEHASASVFDSVNCTTNSTFAPNSTFDVNLSTLFSYLTSNVTNGNNLRFFNATVGSHGSDAAVYGLFMCRGDVPLALCRECVGFAAQNIASSCPSANEAVIWYNECLLRYSNRFFFSTMDEWPRYQIKIPLGDPVVLHSKGFYSALGSIFNGIGNEAALALGGSDNKYAVKQAAATATTTVYGLAQCTPDLSAADCKRCIVDATAEFPRTCCGGSIGGSVMFPSCIVRYETYPFYQHSGTSGTLTTTNKGGGNSRTQVIAMVAVVVVILVMVLCFGYFYLRRKLRKRRKTGLRIRKNCNSIRPDMSASESLEFDLDTIQFATNNFSQGSRIGKGGYGEVYKGILPSGEEIAVKRLSRNSGQGAEEFKNEVLLIAKLQHRNLVRLIGFCLEDQESILIYEYVPNKSLDHFLFDPSKRRELTWSQRYKIIKGIVRGILYLHEDSRLMIIHRDLKPSNVLLDNQMNPKISDFGMARIVDTDHIQGCTNRVVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSSSFDSCRIDDLLSYAWKLWNSDESVFQLLDPVLQESYNPNEVERCIQIGLLCVQENPDERPTMGTIASYLTNDSVEMPYPQEPAFFMKGRTRRHASGHESYSSGHTTKYSFSSSVNDMPTTAFFPR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02560 676 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Adu09g02560 676 ProSiteProfiles Gnk2-homologous domain profile. 146 257 IPR002902 -
Adu09g02560 676 ProSiteProfiles Protein kinase domain profile. 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02560 676 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Adu09g02560 676 Pfam Salt stress response/antifungal 165 255 IPR002902 -
Adu09g02560 676 Gene3D Phosphorylase Kinase; domain 1 311 423 - -
Adu09g02560 676 Gene3D - 159 257 IPR038408 -
Adu09g02560 676 Gene3D - 30 138 IPR038408 -
Adu09g02560 676 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 654 - -
Adu09g02560 676 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02560 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Adu09g02560 676 SUPERFAMILY Protein kinase-like (PK-like) 334 653 IPR011009 -
Adu09g02560 676 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
Adu09g02560 676 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 654 - -
Adu09g02560 676 SMART serkin_6 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02560 676 CDD STKc_IRAK 354 622 - -
Adu09g02560 676 Gene3D Transferase(Phosphotransferase) domain 1 424 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02560 Adu-Chr9 113114106 113118038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02560 37 676 Receptor kinase-like Gene Family AT4G05200 45.289 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu09g02560 Pkinase 7.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02560 - - var:108324780 917.531