LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu09g02559	ATGAGTTCCTTCTACTTCTTCCTTCTGCTTCCATCTCTCTTCTTTTTCTTCCTCCCCATTCACTGCTTTAACATCATCCAAGGAGCCACCGATAAAAATACTAAAGCTTATTATAACTGCACAATCAATGGCACTTTTGCATCCAATAGCACATACCGTTCCAACACCATAACACTCCTTAACTGGCTCTCCTCCAATGCCACCACAGATTCCAGATCCTACAACACTACAGTAATTGGTAAAACCACTTCAGACACAGTCTATGGCCTCTACATTTGTACAAGAGACAGCACACCAGGAATGTGCCAAGACTGTGTGGCAGAAGCATCAAAACTCATATCATCTCTTTGTAGCAAAGCAAAAGAAGCCATGGTTTGGTACCGTGTATGCTATATGCGTTACTCTAATCGTAATTTCTTCTCCAATGTGGAGGAAAGTCCAAGTATCACCTTTGTGAGTGACATTGACTATGTGGGTCAAGTTGGGCGCTACAACACTATTCTCTGGAATATGCTGAATGATATGAGAACTATGGCCGCTGCTGATTCAAATAAAACGGCTGCAATGACTCAGAAAATCACAGATCATCAAAACATATATGGTTCCGCTTGGTGTCTCCCTTATCTTTCCACCGAGAACTGTAGCTGGTGTCTCAGTGATGCCATTGCATATATTCCAGCAGGTTGCTGCAGGGGAAAATCTGGAGGAACTGTCATGTATCCCAGTTGTGGTATTAGATATGAATTATATCCATTCCTTAAGGAACACAATATAATTCCTCGGCCGCTGCGGCCACCACCACCGCAAAGAGATTCTCGTCCTTTGGCTCCACCAGGTAAACGAAAGCAGAAGAACTTACCATTAAGTAAAGTCGCTGTTCCAATTGCCATTGTCGTTGCACTTGTGCTTTTAACTTTGGGTGGTTGCTGCTTTCTACGTAGAAAAGGAAGAAAGAATCAAGATGATATTCTCAAAGAAAACTTTGGGAATGATATAAGCACTTTGGAGTCCTTGCGATTTGAACTAGCCAGGATTGAAGCTGCAACAAATAGATTTGCCACAGAGAACAGGGTAGGCAAAGGTGGATTTGGAGAAGTCTATAAGGGTATTCTTTTAAATGGACAAGAAATTGCTGTGAAGAGGCTTACTAGAAGCTCTGGACAAGGTGCAATAGAGTTTAAAAATGAGGTTCTTGTTATAGCTAAGCTTCAACACAGAAATCTAGTGAGGTTACTGGGATTTTGTTTGGAAGGTGAAGAAAAGATACTCATCTATGAGTATGTGCCAAACAAAAGCCTTGACTACTTTCTTTGTGATCCTCAAAAGCGAAGACAATTATCTTGGATTCAACGTAAACAGATCATCATGGGAATtgctagaggaattctatacctgcatgaagattctcgcctcaaaataatacatcgtgatctgaaacctagtaatgttttgttagatagtaatatgaatccaaaaatatcagattttggCATGGCTAGAATTGTTGCTGTGGATCAAAACGAAGAAAACACGCATAGAATAGTCGGAACATATGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCAGAAAAATCAGATGTTTTTAGTTTTGGAGTCATAATTCTAGAAATTGTTACCGGACAAAAGAATGCAAATTCTTATACTTCAAATCGTGTTGGAGAAAGTCTTTTAAATTATGCTTGGAAGCAATGGAGAGATGGGACACCATTTGAAATACTGGACCCAAATCTACATGAATCATGTTCTCAAATGGAAGTGATTAGATGCATCCAAGTTGGTTTACTATGTGTTCAAGAAAATCCTAATGATAGGCCACAAATGGCAGAAGTAGTTTCATATCTAAGTAACCTCTCCATTGAGTTGCCATTTCCTCACGAGCCTGCTTTTTTTGTACATGGTAGAATGAATCCAAATATGGTCGCACTAGAAGTTGATTCAGGACACCTAAGCAATTGTTCCACTCAACATTCACTCAACGAAATGTCTATTAGTATCTCTGTTCCACGATAG	2040	0.3775	MSSFYFFLLLPSLFFFFLPIHCFNIIQGATDKNTKAYYNCTINGTFASNSTYRSNTITLLNWLSSNATTDSRSYNTTVIGKTTSDTVYGLYICTRDSTPGMCQDCVAEASKLISSLCSKAKEAMVWYRVCYMRYSNRNFFSNVEESPSITFVSDIDYVGQVGRYNTILWNMLNDMRTMAAADSNKTAAMTQKITDHQNIYGSAWCLPYLSTENCSWCLSDAIAYIPAGCCRGKSGGTVMYPSCGIRYELYPFLKEHNIIPRPLRPPPPQRDSRPLAPPGKRKQKNLPLSKVAVPIAIVVALVLLTLGGCCFLRRKGRKNQDDILKENFGNDISTLESLRFELARIEAATNRFATENRVGKGGFGEVYKGILLNGQEIAVKRLTRSSGQGAIEFKNEVLVIAKLQHRNLVRLLGFCLEGEEKILIYEYVPNKSLDYFLCDPQKRRQLSWIQRKQIIMGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAVDQNEENTHRIVGTYGYMSPEYAMLGQFSEKSDVFSFGVIILEIVTGQKNANSYTSNRVGESLLNYAWKQWRDGTPFEILDPNLHESCSQMEVIRCIQVGLLCVQENPNDRPQMAEVVSYLSNLSIELPFPHEPAFFVHGRMNPNMVALEVDSGHLSNCSTQHSLNEMSISISVPR	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu09g02559	679	CDD	STKc_IRAK	358	627	-	-
	Adu09g02559	679	Pfam	Salt stress response/antifungal	162	250	IPR002902	-
	Adu09g02559	679	Pfam	Salt stress response/antifungal	40	136	IPR002902	-
	Adu09g02559	679	ProSiteProfiles	Protein kinase domain profile.	352	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g02559	679	Pfam	Protein tyrosine and serine/threonine kinase	354	624	IPR001245	GO:0004672\|GO:0006468
	Adu09g02559	679	ProSiteProfiles	Gnk2-homologous domain profile.	34	139	IPR002902	-
	Adu09g02559	679	SUPERFAMILY	Protein kinase-like (PK-like)	338	645	IPR011009	-
	Adu09g02559	679	SMART	serkin_6	352	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g02559	679	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Adu09g02559	679	ProSitePatterns	Protein kinases ATP-binding region signature.	358	380	IPR017441	GO:0005524
	Adu09g02559	679	MobiDBLite	consensus disorder prediction	260	274	-	-
	Adu09g02559	679	Gene3D	Transferase(Phosphotransferase) domain 1	428	631	-	-
	Adu09g02559	679	Gene3D	-	32	139	IPR038408	-
	Adu09g02559	679	Gene3D	-	152	252	IPR038408	-
	Adu09g02559	679	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	11	650	-	-
	Adu09g02559	679	Gene3D	Phosphorylase Kinase; domain 1	315	427	-	-
	Adu09g02559	679	MobiDBLite	consensus disorder prediction	260	283	-	-
	Adu09g02559	679	ProSiteProfiles	Gnk2-homologous domain profile.	145	252	IPR002902	-
	Adu09g02559	679	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	11	650	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu09g02559	Adu-Chr9	113058090	113113099	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu09g02559	12	679	Receptor kinase-like Gene Family	AT4G05200	44.741	0.0	555

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Adu09g02559		PK_Tyr_Ser-Thr	3.2e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu09g02559	-		-	gmx:100793219	822.772