Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02558 ATGATCATCAAAATAAAGTTTCTGCTGCTACTCTCCATCACATGGTTTTGTTCTTCTTCTACAACTACTTCACCAGATACCAATTTCCCACATGTCTGTAACTGCACAAGAAACAGCACCTTTGAGTTAAACACCACCTACCATACCAACCTCAAAACTCTTCTATCTTGGCTTTCTTCCAATGCCACTAACTCTGCCGGATCCCACATCACCAAGGTCGTTTCTTCTGTTAACAGCAGCGTCTATGGCCTCTTCCAGTGCAATGCAGATATAACGCCAGAGAAATGCCAAAAGTGCATCGATCAAGCAGTGTATAATGTAACATCAGAGTGTGCAACATCAAAGGAAGCTGTGGTATTTGTCAAATTCTGCTTCCTACGTTACTCTTACAGAGATTTCTTAACAATAGCAGAAGAAAGCCCTAAAATCTTCTTGCTGAACCTCAAGGACTACGTTGGCCAACTTGCTACCTTCAACAATGAAGTGTCGGAGATGATGTATACTCTGAGGCATAAGGTTGCTGATATTCCCATGGGTTCTAGAAGGTTCGCGTACGGGGAACTCAACATCACAGCTAAACAAAGCCTTTATGGCATGGCAAAGTGCACCCCGGACTTGCCCCCTGAGGAATGCAGCTCGTGTCTTGTAAACGCCGCGGCCGACATTCCGACCGGTTGTTGCAAAGGAAAGATCGGAGGAAGGGTTCTTTTTCCCAGTTGTGGCGTTAGATTTGAGCTTTATCGATTTTATGAGCCATCATCTCATCTGAATATTTTGATACTTGGAGGAAATAGGAAAAACAGGTCACACCAGAGACAGATTATTATTTCCATCATCTCAACTGTTGTTTCTGTGCTGCTGCTATGTTTTGGTTGCTCTTTATGTTTCCTAAGTCGACGACGACAAAGGAAGCTTCTTAGGGGAATTCTTCTTAGAGAAAGCTTTGGGGATGAATCATTGGCTTCTTTTGAGTCTTTACAGTTTCAGTTGAGTGAAATTCAAGCTGCTACCAACAACTTCTCCCAAGGAAACAAGATAGGAAGAGGTGGATTTGGGGAAGTTTACAAGGGTGTTCTTGAAAATGGGCAAGAAGTAGCAGCAAAGAGACTCTTGGGAAACTCTTGGCAAGGTGCAGAAGAATTTAAGAATGAGGTTCTTGTTATGGCCAAGCTTCAACATAAAAATCTGGTCAGATTACTGGGGTTTTGTTTGGAAGGACAAGAGAGGATACTTGTCTACGAATATGTCCCTAACAAGAGCCTTGACTACATTTTATTTGATCCTCAGAGAAGCAGGCCATTAACTTGGTCTGAACGATACAAGATTATTAGAGGAATTGCGCGAGGGATTTTATACCTTCATGAGGATTCTCGTTTAACAATCATCCATCGAGATCTTAAACCAAGTAATATTTTATTAGATGATGGTATGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATAGTAATTACAGATCAAATTCAAGTGAATACTCATAGGGTTGTTGGCACATATGGTTATATGTCTCCAGAATATGCAATGGAAGGAATATTTTCGATAAAATCTGACGTGTATAGTTTTGGAATCATAGTACTTGAGATTATGAGTGGAAAATCGAAAAATTCTTTTTGTGAACCACACTTCTCAGATGACATCCGACTTTCTGCATGGGCAAAATGGAAGGAAGAAAAGGCATTGGAATTATTGGATACAACTTTAAAAGGAAATTATTCTGAAAATGAAGTGATGAGAAGTATACAGATTGCCCTGTTATGTGTTCAAGATGATCCAAATGAGAGGCCTACAATGACAGAAATTGTGTCATACCTCAGTAGTTCTTCAGGGGAAGTACCTTTGCCTCAAGAACCAATAGTTTCAAAAAGTAGAAAGATGGATTATATGTCTTACTACCACAAAACGCATTCCATAAATGATTCTATCAACGATTTGTCAGTGAGCACATTTCTCCCTAGATAA 1980 0.4 MIIKIKFLLLLSITWFCSSSTTTSPDTNFPHVCNCTRNSTFELNTTYHTNLKTLLSWLSSNATNSAGSHITKVVSSVNSSVYGLFQCNADITPEKCQKCIDQAVYNVTSECATSKEAVVFVKFCFLRYSYRDFLTIAEESPKIFLLNLKDYVGQLATFNNEVSEMMYTLRHKVADIPMGSRRFAYGELNITAKQSLYGMAKCTPDLPPEECSSCLVNAAADIPTGCCKGKIGGRVLFPSCGVRFELYRFYEPSSHLNILILGGNRKNRSHQRQIIISIISTVVSVLLLCFGCSLCFLSRRRQRKLLRGILLRESFGDESLASFESLQFQLSEIQAATNNFSQGNKIGRGGFGEVYKGVLENGQEVAAKRLLGNSWQGAEEFKNEVLVMAKLQHKNLVRLLGFCLEGQERILVYEYVPNKSLDYILFDPQRSRPLTWSERYKIIRGIARGILYLHEDSRLTIIHRDLKPSNILLDDGMNPKISDFGMARIVITDQIQVNTHRVVGTYGYMSPEYAMEGIFSIKSDVYSFGIIVLEIMSGKSKNSFCEPHFSDDIRLSAWAKWKEEKALELLDTTLKGNYSENEVMRSIQIALLCVQDDPNERPTMTEIVSYLSSSSGEVPLPQEPIVSKSRKMDYMSYYHKTHSINDSINDLSVSTFLPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02558 659 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
Adu09g02558 659 Gene3D - 28 133 IPR038408 -
Adu09g02558 659 Gene3D - 146 249 IPR038408 -
Adu09g02558 659 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02558 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Adu09g02558 659 Gene3D Phosphorylase Kinase; domain 1 310 415 - -
Adu09g02558 659 ProSiteProfiles Protein kinase domain profile. 340 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02558 659 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 264 652 - -
Adu09g02558 659 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 34 255 - -
Adu09g02558 659 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Adu09g02558 659 SUPERFAMILY Protein kinase-like (PK-like) 325 641 IPR011009 -
Adu09g02558 659 Pfam Protein tyrosine and serine/threonine kinase 342 611 IPR001245 GO:0004672|GO:0006468
Adu09g02558 659 PIRSF TyrPK_CSF1-R 426 542 - -
Adu09g02558 659 PIRSF TyrPK_CSF1-R 574 648 - -
Adu09g02558 659 PIRSF TyrPK_CSF1-R 337 424 - -
Adu09g02558 659 PIRSF TyrPK_CSF1-R 14 114 - -
Adu09g02558 659 Pfam Salt stress response/antifungal 156 247 IPR002902 -
Adu09g02558 659 Pfam Salt stress response/antifungal 33 129 IPR002902 -
Adu09g02558 659 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Adu09g02558 659 ProSiteProfiles Gnk2-homologous domain profile. 139 249 IPR002902 -
Adu09g02558 659 CDD STKc_IRAK 346 611 - -
Adu09g02558 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 255 - -
Adu09g02558 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 264 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02558 Adu-Chr9 113053769 113056455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02558 10 622 Receptor kinase-like Gene Family AT4G05200 46.677 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu09g02558 PK_Tyr_Ser-Thr 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02558 - - adu:107467162 1283.86