Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02548 ATGGCGTGCGGCACAGTAATGCAGAGGACACATGCTGACGACTTGGGGAAAGAGCGTGTGGCGCGGTGGTGCAGAGGAGGACACATGCAGCGGGATTTTGCCCGAAGAAGAAAAAGGAGGGGTGGTCTTGCAGTGGAGGGTGCTGCCGGCTGCAAAAATAGAGAATGGTTGTTCGGGTGTTTGGTGAAGCTTGATGATGAAGCTTGGTGTGGTGTTCCATGGCACACTGATGTTGCGTGTGAGGAGTTGCAGTCACTGAATGAGGATGAGAGAGGGAGGGATGATCTTCTTCTTAGGGACCTTGCTGGTCAAAAGAAATGGAATAGGTGTCCGAGATACGAGTTATATGTGGAGAAGACTGAAGGGAGTTTGCATATTACATGCAGGTGCCGGTTCGAGTTTTGCTATGCTTGTGGTGAACCGTGGACTACCACTCATGGTGGATGCCAGAGAAATTAG 459 0.5098 MACGTVMQRTHADDLGKERVARWCRGGHMQRDFARRRKRRGGLAVEGAAGCKNREWLFGCLVKLDDEAWCGVPWHTDVACEELQSLNEDERGRDDLLLRDLAGQKKWNRCPRYELYVEKTEGSLHITCRCRFEFCYACGEPWTTTHGGCQRN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02548 152 SUPERFAMILY RING/U-box 91 150 - -
Adu09g02548 152 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 68 151 - -
Adu09g02548 152 Gene3D - 78 152 - -
Adu09g02548 152 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 68 151 IPR031127 GO:0004842|GO:0016567
Adu09g02548 152 Pfam IBR domain, a half RING-finger domain 102 149 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02548 Adu-Chr9 112968469 112970887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02548 70 141 C3H Transcription Factor Family AT2G19610 34.247 4.84e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02548 K11975 - adu:107466847 183.341