Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02544 ATGAACAACAATTCCTCAGGTAGTGATTATTTTCTAAGGAAAATTCTAGAGATACAAGATTTTGAGGTTGACACTGACAGCCACGCCAACATGCAACAACCTCCTCCTGGCTATGGCAGCGATCACCCCAAGAAGAAGCGCTACCAGCGCCACACGCCGTATCAGATACAAGAGATGGAAACGTTCTTCAAGGCGTGCCCTCACCCAGATGAGCAGCAAAGGATAGAGCTGGGTAATGTTTTGGGATTAGACCATTTGCAAATCAAGTTTTGGTTCCAGAACAAGCGAACCCAACTCAAGAATCAATATGAACGCAACGAGAACTTTGCACTGAAGAATGAGAATGAGGAGCTTCGAGCTGAGAACGAGAACTACAAGGAGATCCTAAATAGTATAAGATGTCATGGCTGCGGAGGCCCACCTCCTCCTCCATTGACCTATGACCAGATGAGGCAGGAGAATAACAAGCTAAGAGAACAGATTGAGTGGATGTCAACAATGATGTCTAACTGTGTTCTACAAGAGCCAGATAATACTTCCAACCCCAACATCACCAGGCCTCAGAATGTGCCTAATATAGAATCATCTCAGCAAAACAACACCAACAACATGATGCCTCAGACTCAGAGTGTGCCTAATCAAGAACTTGGTAACATGGCATCACCACCTCAGAGCAATAACATTGACATACTGTCTCCAAGTATGTTTAATCAAGGAATTATTGACAGCATGCGATTGACTCAGCAGAACAATGGCATTGACATGCCTCAGAATGTGATTAATCATGGAATTGTCAAAGACATGCCATCATCTCAGGCTCACAACAATGTTATTAACGTGACTCCGCCTATGAGTATGTTAAATCAGGGAATTGGTGATAACATTGCCGTTATTCCTCCTAGTGTGCTTGATCAAGGAAATTGTAGCGTGCCATCATCATCTCAACACAACAACGAAATTTACATTAACCTGCCTTTGAGTTCGCTTAATCAAGATGTTGGTAGCTATGGAGCAAAGTCAAAAGACAAAGCAGGGGAAACGAGTAGTGGTAGTGACCCTCTAATTAGGTCACTCCCAGTTTCTAACAAAGCCATGATCGAGGAGCTTGCGGCTGCGTCACTGGAGGAACTCAAAGCCTTGGTTCAAGCAGGGGAGCCCATGTGGGTCAGTGGGGCCCACAACTCTGAAACTATCAACGAACAAGAATACTATAGGACTTTCCCTGGTGGAATTGGTCCAAGACTCTTGGGGTATAAATCTGAATCTTCAAGGGAATCCAGGGTCATCAACATGAATCACGTTAACCTCGTTGAGATCCTTAATGATGTGGATCTATGGTCACGTGTGTTTTGCAGCATTGTTTCAAAAGCAGCAGGATTTCAAGTCCTATCAACTGGACAGGCAGGAAGTTATGATGGAAACTTGCAAGTGGTGTCATCAGAGTTCCAAATGCCAACACCACTTGTTCCTGCTCGCGAGTACTATTTCCTAAGGTACTGCAAGAAGCTCCAAGATGGGAGATGGGTGGTGGTCGATGCTTCTCTGGAAACTTCACAACCAAATGCAACAATCCCTCCGACTCGAAGAAGGCCCTCTGGTTGCCTGATTCAGGCATCCCCAGATGGTTACTCAACAAAGGTTACCTGGGTTGAACATGTAGAAGTGGATGACAGAGCACTAATGGTGAATAGTATGTATAAGCCTCTAGTTGAATCTGGCTTAGCCTTTGGAGCTAGACGCTGGGTCGCACAATTAGATAGAAGATGCGAACGTATTGCTAGTGCAGTACAAACCACCACCATACTGCAACCACAAGAAGACCAACTTAGTGTGACGAGTGTTGAGGGCAAAAAGGGGTTGGTGAAGCTGGCAGAGAGAATGGTTATGGACTTTTTAAGTGGTGTTGGTGCTTCAACAGTAGAAAATTGGGCAATCGTAACTCCATCAACAAATCACAGCAATATAAGAATCATAACCAGAAAGGTTGAGGACGATCCAGGTAGACCTTCCGGTATAGTTATCGGTGCCGCAACTTGTTTCCACCTCGCAGTTCCTCCAAACAGCTTCTTTGATAGGGTTCGAACTGCAAACGCAAGAGCAGAGTGGGATGTTCTCTGTACCGGAGGTGTTGCTGAGGAATTTGCACACATAAAAAATGGTCGCGACCCTGGGAACTGTATCACATTATTCCGTATTAAGAGTCCAGATGCGAAGAACAACGGGATGATAATAGTTCAAGAGAGTAGCAGCGATTCAACAGGGTCATTTGTGATATACGCACCGGTTGATATGAATTCGATCAATGCAGTGATTGGAGGGAGAGATCCCGATGAACTTCCGATTTTGCCCTCGGGAATGGCGATTCTTCCAGATGGAGGTGGAGGTTGTTTGGTGACGTTGGCATTCCAGATATTGATCGAGTCAGATCCAACAAAGAAGATATCGATCTGTTCAGTGAGCACTATTAACCAGTTGGTTAAGGTTACGGTTAACAACATCAAAGCTCTATTCAAGACTGAGGAGGAACCTAACGAGAGAATCTAA 2544 0.4481 MNNNSSGSDYFLRKILEIQDFEVDTDSHANMQQPPPGYGSDHPKKKRYQRHTPYQIQEMETFFKACPHPDEQQRIELGNVLGLDHLQIKFWFQNKRTQLKNQYERNENFALKNENEELRAENENYKEILNSIRCHGCGGPPPPPLTYDQMRQENNKLREQIEWMSTMMSNCVLQEPDNTSNPNITRPQNVPNIESSQQNNTNNMMPQTQSVPNQELGNMASPPQSNNIDILSPSMFNQGIIDSMRLTQQNNGIDMPQNVINHGIVKDMPSSQAHNNVINVTPPMSMLNQGIGDNIAVIPPSVLDQGNCSVPSSSQHNNEIYINLPLSSLNQDVGSYGAKSKDKAGETSSGSDPLIRSLPVSNKAMIEELAAASLEELKALVQAGEPMWVSGAHNSETINEQEYYRTFPGGIGPRLLGYKSESSRESRVINMNHVNLVEILNDVDLWSRVFCSIVSKAAGFQVLSTGQAGSYDGNLQVVSSEFQMPTPLVPAREYYFLRYCKKLQDGRWVVVDASLETSQPNATIPPTRRRPSGCLIQASPDGYSTKVTWVEHVEVDDRALMVNSMYKPLVESGLAFGARRWVAQLDRRCERIASAVQTTTILQPQEDQLSVTSVEGKKGLVKLAERMVMDFLSGVGASTVENWAIVTPSTNHSNIRIITRKVEDDPGRPSGIVIGAATCFHLAVPPNSFFDRVRTANARAEWDVLCTGGVAEEFAHIKNGRDPGNCITLFRIKSPDAKNNGMIIVQESSSDSTGSFVIYAPVDMNSINAVIGGRDPDELPILPSGMAILPDGGGGCLVTLAFQILIESDPTKKISICSVSTINQLVKVTVNNIKALFKTEEEPNERI 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02544 847 MobiDBLite consensus disorder prediction 177 223 - -
Adu09g02544 847 CDD homeodomain 45 102 IPR001356 GO:0003677
Adu09g02544 847 SUPERFAMILY Bet v1-like 616 807 - -
Adu09g02544 847 Gene3D - 427 585 IPR023393 -
Adu09g02544 847 Coils Coil 101 135 - -
Adu09g02544 847 MobiDBLite consensus disorder prediction 27 48 - -
Adu09g02544 847 SMART HOX_1 44 106 IPR001356 GO:0003677
Adu09g02544 847 Coils Coil 147 167 - -
Adu09g02544 847 ProSiteProfiles START domain profile. 359 594 IPR002913 GO:0008289
Adu09g02544 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 340 836 - -
Adu09g02544 847 Pfam Homeodomain 45 100 IPR001356 GO:0003677
Adu09g02544 847 SUPERFAMILY Bet v1-like 363 593 - -
Adu09g02544 847 MobiDBLite consensus disorder prediction 333 355 - -
Adu09g02544 847 SUPERFAMILY Homeodomain-like 39 104 IPR009057 -
Adu09g02544 847 CDD START_ArGLABRA2_like 363 590 - -
Adu09g02544 847 Gene3D - 32 118 - -
Adu09g02544 847 SMART START_1 368 591 IPR002913 GO:0008289
Adu09g02544 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 340 836 IPR042160 -
Adu09g02544 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 196 IPR042160 -
Adu09g02544 847 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Adu09g02544 847 Pfam START domain 369 591 IPR002913 GO:0008289
Adu09g02544 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02544 Adu-Chr9 112907432 112910839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02544 320 835 Homeobox Transcription Factor Family AT4G04890 51.481 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu09g02544 START 5.4e-42 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02544 K09338 - gmx:100782240 563.148