Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02535 ATGAAGGATTTCTTGGGTTCCGTTCGCCAATCCTTTGTCTTCAGAACTCCACCGCCAGCCACCGCCACCACCGACGAAGATGGACTATTCGCCGGATTCGTCGACCGGATCAGCTCCACCATCCGCAAGTCCCGCGTCGGACTCTTCTCTCAGCCCCGCCTCAAGCATCCCCGTCTTCCTTCGCCGCCGACACCTCCCAAGTGCTCCGACGACGCCCCTCCTTTCCGGTGGCGGAAGGGCGAACTGATCGGCAGCGGCGCCTTCGGTCGAGTGTACATGGGCATGAATCTCGACTCTGGCGAGCTTATTGCTGTCAAACAGGTTTTGATTGCGCCTGGTTGTGCTTCAAAGAAGAATACTCAAGCTAATAATATTCGGGAGCTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAGCATCCAAACATTGTTAGATACTTGGGAACCGCTAGAGAGGAGGATTCCTTAAATATTCTACTAGAGTTTGTTCCCGGTGGGTCTATCTCTTCGCTCCTTGGGAAATTTGGATCATTCCCTGAGCCAGTTATCAAAATGTATACAAAACAGCTTCTACTGGGCCTTGAATACCTTCATGATAACGGGATTATTCATAGAGATATTAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGCATCAAACTAGCGGACTTCGGTGCATCCAAGAAAGTTGTTGAACTGGCAACCATAAATGGTACGAAGTCAATAAAGGGTACGCCGCATTGGATGTCTCCTGAAGTCATTTTACAGACAGGACATACAATCTCTACTGACATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGGAAACCTCCATGGAGTCAACAGTATCCTCAGGAGGCTTCTGCTCTTTACTACATTGGGACAACTAAATCTCATCCACCCATACCTGAATATCTGTCTGCCGAGGCACAGGACTTTTTGCTGAAATGCTTCCACAAGGAACCAGATCTGAGGCCTTCTGCATCAGACTTGCTACTGCATCCTTTCATCTCCTGCAATTACCGCGAATCTCATTCGATGTTATGCAGTTCAATCAGGGACTCTTGCAATGCAACACATGAGAAGAAACCTAGAGACTTTTTGGATTCTGTTCGGGGATCAACCTGCACAGGCGTGAAGGATGTCTGTCAACTGGATAGCATAAGACTCTCAACTATGTGTTCTGAAAATTTTCTAAAGGCAGATTGCTACCAGAGAGCTGACAGCAATGATGATGACATATGTCAGATAGCTGATGAAGATGATTTTTTAGTTGACACATCAGTAAAACCAAAATCTCTATCTACTTCTGAAGATATAAAGAGTTTCAATCCAATGTGTGAACCTGTGGATGACTGGCCTTGCAAGTTTGATGAAGATCTAAATTTAAAGGAAAGCAGAATGAACTTGTCTTCAGCTCAAGCTGTTAGTGAAACTATGACAGGTGCTGAACCATATCCTGACGTGAAGGATAAATTCTCATTTTCATGTGAGCATTCAGGAGATGAAGATGATGATGAAGTTACTGAGTCCAAAATTAAAGCCTTCCTGGATGAGAAGGCCATTGAACTGAAGAAACTCCAAACACCTCTTTTTGAAGAATATCTTAGTGTTTCAAATGCAGCCATTGCACCTATTGCAATTGCACCAAGCAATGATGTTTCGAAAATCCCAAATGCAACATCACAGGGTAGATCTCCTAGTCATGCTAGGAGACGATTGTCAATGGCTGGTAGTGCCAGTGTTTCAAGCAGTAAGAGTCATAACAAATATCAACCACAGCTTGGTGGTGCACCGAATCAACCTTTGCAGGAAATCCAGCCTTCTGATCTTAACGAATCAAAGGAGACTCTTCATGAAGCTCAGCCAGGTTCATTCAGTGTCAGGGCGAGCTTCTCTGAGAGACAAAGAAAATGGAAAGAAGAACTTGTTAAAAGAAAATGGAAAGAAGATCTTTTTAAAGAGATGGACTTTAAGCGAGAGATTTGGCGTAAGGCAGGATTAGGAGGGAAGATAACTTCACCGAAGGATTGCGAGTTTTATGGAGACTGA 2064 0.4453 MKDFLGSVRQSFVFRTPPPATATTDEDGLFAGFVDRISSTIRKSRVGLFSQPRLKHPRLPSPPTPPKCSDDAPPFRWRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIAPGCASKKNTQANNIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPEPVIKMYTKQLLLGLEYLHDNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGTKSIKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEASALYYIGTTKSHPPIPEYLSAEAQDFLLKCFHKEPDLRPSASDLLLHPFISCNYRESHSMLCSSIRDSCNATHEKKPRDFLDSVRGSTCTGVKDVCQLDSIRLSTMCSENFLKADCYQRADSNDDDICQIADEDDFLVDTSVKPKSLSTSEDIKSFNPMCEPVDDWPCKFDEDLNLKESRMNLSSAQAVSETMTGAEPYPDVKDKFSFSCEHSGDEDDDEVTESKIKAFLDEKAIELKKLQTPLFEEYLSVSNAAIAPIAIAPSNDVSKIPNATSQGRSPSHARRRLSMAGSASVSSSKSHNKYQPQLGGAPNQPLQEIQPSDLNESKETLHEAQPGSFSVRASFSERQRKWKEELVKRKWKEDLFKEMDFKREIWRKAGLGGKITSPKDCEFYGD 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02535 687 SUPERFAMILY Protein kinase-like (PK-like) 76 342 IPR011009 -
Adu09g02535 687 MobiDBLite consensus disorder prediction 622 636 - -
Adu09g02535 687 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Adu09g02535 687 SMART serkin_6 77 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02535 687 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 59 578 - -
Adu09g02535 687 Coils Coil 118 138 - -
Adu09g02535 687 MobiDBLite consensus disorder prediction 558 573 - -
Adu09g02535 687 ProSiteProfiles Protein kinase domain profile. 77 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02535 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Adu09g02535 687 Gene3D Transferase(Phosphotransferase) domain 1 76 376 - -
Adu09g02535 687 MobiDBLite consensus disorder prediction 581 615 - -
Adu09g02535 687 MobiDBLite consensus disorder prediction 557 640 - -
Adu09g02535 687 CDD STKc_MAPKKK 76 341 - -
Adu09g02535 687 Pfam Protein kinase domain 78 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02535 687 PANTHER MAP KINASE KINASE KINASE 59 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02535 Adu-Chr9 112810206 112814955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02535 1 675 MAP Kinase Kinase Kinase AT3G06030 54.772 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu09g02535 Pkinase 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02535 - K20606 gmx:100795863 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02535 09 112810206 112814955 Adu09g02535 09 112810206 112814955 ECH
Adu04g00408 04 4791855 4793552 Adu09g02535 09 112810206 112814955 ECH