Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02520 ATGCGAGAGGATTCAAACTACGCACATAGAAAGTATATGGCTAAAGTTTTTAGGGAAAGTCCCGAACTCTTAGTATTGGATGAAGGGCACAATCTGAGAAGCACTAAGTCCAGGTTGAGAAAAGTTTTGATGAAGGTACAAATAGAATTGAGAATATTGCTGTCTGGTACATTGTTTCAGAACAATTTCTGTGAATACTTCAACACTCTCTTGTTGGCAAGACCAAAGTTTGCATATGAGGTGCTGAAAGTATTAGACCCAAAATACAAGAAGAAGAAAGGAAAAGTGAGGGCAGTGGAGTACCGGGCAAGGAAATTCTTCATAGAAGTATTCTCTAGGAAAATCGACTCGAACAATGGTGAGGAGAGGATGCAAGGTCTTAACATGTTGAAAGATTTAACAAATGGTTTTATGGATGTTTATGAAGGTAGTAGCTCAGATGACCTGCCCGATTTGCAAATTTATACTTTGTTGATTAACACAACCAATATGCAACATGAGATGTTGAAGAGGCTGCACAAGAAAATACAGATGAATGATGAAAGAATTGAGAGTGCAGAGGAAAAGAGGGAGAACAAGAAGGAAGGAGAGGCTGAAGGGAAACATGAGGCTGGGGCGGATTGCAAAAGTAGTTATCAATCAAAGAATCCATTCCCACCTTAA 663 0.3922 MREDSNYAHRKYMAKVFRESPELLVLDEGHNLRSTKSRLRKVLMKVQIELRILLSGTLFQNNFCEYFNTLLLARPKFAYEVLKVLDPKYKKKKGKVRAVEYRARKFFIEVFSRKIDSNNGEERMQGLNMLKDLTNGFMDVYEGSSSDDLPDLQIYTLLINTTNMQHEMLKRLHKKIQMNDERIESAEEKRENKKEGEAEGKHEAGADCKSSYQSKNPFPP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02520 220 MobiDBLite consensus disorder prediction 180 208 - -
Adu09g02520 220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 111 IPR027417 -
Adu09g02520 220 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 1 179 - -
Adu09g02520 220 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 76 IPR014001 -
Adu09g02520 220 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 179 IPR044567 GO:0080188
Adu09g02520 220 MobiDBLite consensus disorder prediction 180 220 - -
Adu09g02520 220 Gene3D - 5 112 IPR038718 -
Adu09g02520 220 Coils Coil 169 189 - -
Adu09g02520 220 Pfam SNF2-related domain 9 191 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02520 Adu-Chr9 112675538 112676200 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Adu09g02520 SNF2_N 1e-09 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02520 K10875 - gmx:100785036 248.054