Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02518 ATGGCTGAAGTTCTGAGGGAAAGTCCCGAACTCTTAGTATTGGATGAAGGGCACAATCCGAGAAGCACTAAGTCCAGGTTGACGAAAGTTTTTACGAAGGTACAAACAGAATTGAGAATATTGCTGGCTGGTACATTGTTTCAGAACAATTTCTGTGAATACTTCAACACTCTCTTGTTGGCAAGACCAAAGTTTGCATATGAGGTGCTGAAAGTATTAGACCCGAAATACAAGAAGAAGAAAGGAAAAGTGAGGGTAGTGGAGTATCAGGCAAGGAAATTATTCATAGAAGTGTTCTCTAGGAAAATCGACTCGAACAATGGTGAGGAGAGGATGCAAGGTCTTAACATGTTGAGAAATTTAACAAATGGTTTATGGATGTTTATGAAACTTGAGATGTTGAAGAGGCTGCACAAGAAAATGCAGATGAATAATGAAAGAATGGAGAGTGCAGAGGAAGAGAGGGAGAACAAGAAGGAAGGAGAGGTTGAAGGGAAGCATGAGGCTGGGGCGGATTGCAAAAATCCTTACAAAATCTTGACATTGATGCGAGAGGATTCGAAGTACGCACATAGAAAGTATATGGCTAAAGTTCTTAGGAAAAGTGTCGGACTCTTAGTATTGGATGAAGGGCACAATCCGAGAAGCACTAAGTCTAGACCAAAGTTTGCATATGAGATGCTGAAAGTATTAGACCCAAAATACAAGAAAAAGAAAGGAAAAGTGAGGGCAGTGGAGTACTGGGCAAGGAAATTCTTCATAGAAGTGTTCTCTAGAAAAATCTACTCGAACAATGGCGAGGAGAGGATGCAAGGCCTTAACATGTTGAGAAATTTAACAAATGGTTTTATGGATGTTTATGAAGGTAGTAGCTCGGATGACCTGCCCAATTTGCAAATTTATACTTTGTTGATGAACACAACCGATATGCAGCATGAGATGTTGAAGAGGCTGCACAAGAAAATGCATATGAATGATGAAAGAATAGAAAGTGCAGAGGAAGAGAGGGAGAACAAGAAGGAAGGAGAGGCTGAAGGAAAGCATGAGGCTAGGGCGGATTGCAAAAGTCATTATCAACCAAAGAATCCACTTCCACCTTAA 1101 0.406 MAEVLRESPELLVLDEGHNPRSTKSRLTKVFTKVQTELRILLAGTLFQNNFCEYFNTLLLARPKFAYEVLKVLDPKYKKKKGKVRVVEYQARKLFIEVFSRKIDSNNGEERMQGLNMLRNLTNGLWMFMKLEMLKRLHKKMQMNNERMESAEEERENKKEGEVEGKHEAGADCKNPYKILTLMREDSKYAHRKYMAKVLRKSVGLLVLDEGHNPRSTKSRPKFAYEMLKVLDPKYKKKKGKVRAVEYWARKFFIEVFSRKIYSNNGEERMQGLNMLRNLTNGFMDVYEGSSSDDLPNLQIYTLLMNTTDMQHEMLKRLHKKMHMNDERIESAEEERENKKEGEAEGKHEARADCKSHYQPKNPLPP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02518 366 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 1 125 - -
Adu09g02518 366 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 180 325 - -
Adu09g02518 366 MobiDBLite consensus disorder prediction 326 356 - -
Adu09g02518 366 MobiDBLite consensus disorder prediction 326 366 - -
Adu09g02518 366 MobiDBLite consensus disorder prediction 145 169 - -
Adu09g02518 366 Coils Coil 315 335 - -
Adu09g02518 366 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 125 IPR044567 GO:0080188
Adu09g02518 366 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 180 325 IPR044567 GO:0080188
Adu09g02518 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 74 IPR027417 -
Adu09g02518 366 Gene3D - 1 96 IPR038718 -
Adu09g02518 366 Coils Coil 131 161 - -
Adu09g02518 366 Pfam SNF2-related domain 9 72 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02518 Adu-Chr9 112672976 112674879 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Adu09g02518 SNF2_N 6.2e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02518 K10875 - pvy:116106117 169.088