Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02494 ATGGAACCGGGCATGAGATCCGATGGCCCTTCTGGGGCTTTGGTGAAGAACAGGAGATCTTCAGGGTGTTTGGTTGTTAGGAAGAAAGGTGATGGATTGAGTGGTGGGGTTGGTAGTTCTTTCAGCTCCAGGAAGCTGAATGCATCAAAGAAAGGGAAGAAGAGGCCCAAGGTTGAGTTAAGTAGTAGCGATTCGGAATCGAGTCAGGAGCTATTGATGCCATCTTCTAGAGGGCTTGGTCCTGAGACCATTCGAGTATGCAATGGTTTGACAGCTGTTAAGCGGGACGAGGCTGGTGATGGTGGAACTGGAAGGAAGCGGGAGAGGTTTGAGGACATTAGTCATAACGGTGATGAGATGGGGGAGGGAAATGGTTCAGAGAGGAGGGAAAAGAAACTTAGCAAGATTGATGTGTTTGATTTCGACGAATACGATGCTATGGATGCAGACATGATGAGAAGGAGCCATGTAGATAGCAATGGGGGCGGCTTTGGAGGGGAAAGGCTTGGGGGAGCAATGCATGCTGCTAGAGGTGGCACTGATAGGGAATTCAAAACTGGTTCAAGCAGACACACCCTTAATAAGAGAAAGAACTCCCATTGTGATAAGGCAAGTCACTTGCACCCAAGAGATAGTAAATTAAAGAAGTGGGATGCAGCTCAGCATCCTCAGCCCGTGCCGAAGGAGAAGTTTAATTCTGATGAATCCATTAGGGTTCAAGGGAAAAATGGTGTTTTAAAGGTGATGGTTAATAAGAAGATGTGTAAGCCATCAAAGCACGTTGATAATCGCAAACATGTAGAAGGGCAACGAAGTTTGAGGGCTGAGGGCATTGCCAAGAAGAATGTTCTGATCCATCCTTCATCTTGCTTGGAAAAAAAACCTGTTAAGAAACAAGGTTTACATGCTAGGACAGAGAAGAAATTGGTAGCAAGAAGAAAATCTTTGTCAAGTAACGACACTAAGGGTGATGACCAGGATTCAGATAACAGTGGCACATCATTGAATGTGGGAGTGAAGTGCATTAAAGCTTTCAAGTCTTTAAAGAGGGGGACCTCGGACGATGAACAGACTCCTAAGCATGAAAAGACCCCAACCACAGCAGGAACTAAAAAGGAGAAAATAAGGCGTGGTAGTGGCACAGAAAAGCAGAAGCTACGAGAACAGATACGGGAGATGCTTCTTAATGCAGGTTGGACCATAGACTATCGCCCTCGGAGGAAGAGAGACTATCTTGATGCAGTTTACATTAATCCTGGGGGTACAGCCTATTGGTCCATCATCAAGGCCTATGAGGCGTTTCAGAAGCAATTGAGTGCTGACGACCCTGGGGCCAAGCCCAATGGGGAGTGCTCTTCTTTTGCTCGTATCACAGATGATGTGCTTAGTCAGTTAACAAGGAATACTCAGAAGAAGATGGAGAGAGAATTAAAGAAGAAGAAGAAGAAGAAACAGAAGAAGGAAAGAGATGATAGTGAGAGTGATAGTGGAAAAGAACCTCGCATTAAGAGATCTTTAAGCAACAAGCGTGATATGAATGGCATGGAAAGTGATAGTGATGAAGAGAAATTAAGCTCCTTTTTAAAGCGGGAGCGTAAGTCAATGAAAAATAAAATGATTGAAAATACTGTTAACAGTTGTAGATCTACAAGCAAGAAAGCTGACCTTCACACAGATGAAGGAACTGAAAAATCACTTTTAGGAAATGATCCTCATCAACTACATGGGAGGAAAAGTAAGAAACATGGAAGGTGCACTTTATTGGTTCGTAATTCCAACATAGGGTCAAATTCAGATTCTGATGACTATGTTCCATATATGGGCAAACGAACGGTGCTTTCCTGGTTGGTTGACTCTGGAGCTGTACAGTTAAGCCAAAAGGTTCAGTATCGTAGAAGGAAACGTGTAATGCAGGAGGGATGGGTCACCAGGGATGGGATTCATTGTAGTTGCTGTAGTAAAATACTCACTGTTTCCAAGTTTGGGCTTCATGCAGGAAGTAAATTGCGCCAGCCATATCAAAACATATATTTGGATTCTGGAGATTCTCTTCTACAGTGCCAGATAGATGCATGGAATAAACAAGAGAATTCTGAGAAAATTGCTTTCCATGCAGTAGATATTGATGGTAATGATCCAAATGATGATACTTGTGGTATATGTGGAGATGGAGGGGATTTGATCTGTTGTGATGGTTGTCCATCAACGTTTCATCTGAGTTGCTTGAATATACAGATGCTCCCCCCTGGTGAATGGCATTGTCCAAATTGCACATGCAAATTTTGTGGAGTAGTCCGTGGTCCTGTAAACAAAGAAGATGAATCAACTTTAAATGCCCTACATAGATGCAACTTATGCGATAAAAAATTTCATGAATGTTGTGCTAAGGAGATGAAAACCCTTCCTACTAACTCCGATATGTCAAGCCCTTCCTTTTGCGGAAGGGACTGCAAAGAGCTTTCTGAGCACTTGAAGAAATACCTTGGTACTAGGCATGAAATAGATGGAGGCTTCACATGGTCTCTCATTCATAGAACAGAAGACGACTCAGAGGCATCTAGTAGGGGAATTATGCAGAGGGTTGAATGGAACTCCAAGTTAGCTGTTGCACTGACTGTGATGAATGAATGCTTTTTGCCAGTTATTGATAGGAGAAGTGGGGTCAATTTAATACATAATGTTTTATATAATAGTGGGTCAAACTTCAGCCGGTTGAATTACACTGGCTTTTATACTGCGATTTTGGAGCAAGGCGATGAAATAATTTCTGCAGCTTCTATCAGGTTCCATGGGACCAAGTTAGCAGAGATGCCATTCATTGGAACTCGCCATATGTATAGGCATCAGGGGATGTTGCGCAGGCTTTTTTCTGCCATTGAATTGGAAATGAGGTCATTGAATATGTTGGTCTTCCCCGGTATAGATATGTTGGAGAAAGTGCTAACCAAACAAGGAAAACTTGATGGTGTTGAGAAAATGGAAACTAGAGATGAATTTGTTACTATGCCTAATATGGCTGGTAAGTTGGATATGAATTCCTCAGCTCTGGAAGATCCTGAACGGAGTGATCATGCTAATTCAAATCCTGACAATGAGATAAACGACGACTCTAGTGATGCTTCTCAAGAACAGGATAATCACATTTTGGTTGACAGCACCAAGTCTCATTCTGCAGATAGATCATCTGATTTTGTTTCAAATAAATGTGTTTCTCCTTCTAGTACCAGGGATGATGTGCTAGAAACAAACAATAAAGCAGTGACAGCTTTTCCTGATTGCCATGAACTTGCTGCTTTGCATTCGGTGAGTGTATGTTCGGACCCTGATTCTGCGAAAAATCTGGCACAACCTGTTTCTGATGGGAAATGTCACATGCACACTGATGACGTTAATCCAGGGTTGGATTCTCAAGTGGGAGATAATGCTTTGTCTTCTAAAGAGGTTGATATGAATGATGCCCGTGATGAGGTTCTTGAATCAGTGAATTTATCTCAGGGTAAAATTACGAAGGAGAAAAATGAAGTTGTGGATGTCTCTGGTTCTGTTCCCAATCATGCTGATGAGAGTTCTTTGCAAGTGAAATCTGATTTGATGGATGAAATTGTATTGGAGGGAGAAAAGAATTTGGACAAAGAGGTTGCATCACGTGAAATGTGTGTGGATGAAACTGGCCTAAGGGCATCTGGTGCTAGTTCTTAA 3699 0.4242 MEPGMRSDGPSGALVKNRRSSGCLVVRKKGDGLSGGVGSSFSSRKLNASKKGKKRPKVELSSSDSESSQELLMPSSRGLGPETIRVCNGLTAVKRDEAGDGGTGRKRERFEDISHNGDEMGEGNGSERREKKLSKIDVFDFDEYDAMDADMMRRSHVDSNGGGFGGERLGGAMHAARGGTDREFKTGSSRHTLNKRKNSHCDKASHLHPRDSKLKKWDAAQHPQPVPKEKFNSDESIRVQGKNGVLKVMVNKKMCKPSKHVDNRKHVEGQRSLRAEGIAKKNVLIHPSSCLEKKPVKKQGLHARTEKKLVARRKSLSSNDTKGDDQDSDNSGTSLNVGVKCIKAFKSLKRGTSDDEQTPKHEKTPTTAGTKKEKIRRGSGTEKQKLREQIREMLLNAGWTIDYRPRRKRDYLDAVYINPGGTAYWSIIKAYEAFQKQLSADDPGAKPNGECSSFARITDDVLSQLTRNTQKKMERELKKKKKKKQKKERDDSESDSGKEPRIKRSLSNKRDMNGMESDSDEEKLSSFLKRERKSMKNKMIENTVNSCRSTSKKADLHTDEGTEKSLLGNDPHQLHGRKSKKHGRCTLLVRNSNIGSNSDSDDYVPYMGKRTVLSWLVDSGAVQLSQKVQYRRRKRVMQEGWVTRDGIHCSCCSKILTVSKFGLHAGSKLRQPYQNIYLDSGDSLLQCQIDAWNKQENSEKIAFHAVDIDGNDPNDDTCGICGDGGDLICCDGCPSTFHLSCLNIQMLPPGEWHCPNCTCKFCGVVRGPVNKEDESTLNALHRCNLCDKKFHECCAKEMKTLPTNSDMSSPSFCGRDCKELSEHLKKYLGTRHEIDGGFTWSLIHRTEDDSEASSRGIMQRVEWNSKLAVALTVMNECFLPVIDRRSGVNLIHNVLYNSGSNFSRLNYTGFYTAILEQGDEIISAASIRFHGTKLAEMPFIGTRHMYRHQGMLRRLFSAIELEMRSLNMLVFPGIDMLEKVLTKQGKLDGVEKMETRDEFVTMPNMAGKLDMNSSALEDPERSDHANSNPDNEINDDSSDASQEQDNHILVDSTKSHSADRSSDFVSNKCVSPSSTRDDVLETNNKAVTAFPDCHELAALHSVSVCSDPDSAKNLAQPVSDGKCHMHTDDVNPGLDSQVGDNALSSKEVDMNDARDEVLESVNLSQGKITKEKNEVVDVSGSVPNHADESSLQVKSDLMDEIVLEGEKNLDKEVASREMCVDETGLRASGASS 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02494 1232 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 962 1171 - -
Adu09g02494 1232 SUPERFAMILY FYVE/PHD zinc finger 707 766 IPR011011 -
Adu09g02494 1232 CDD PHD2_CHD_II 718 757 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 98 133 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 260 275 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 291 327 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 465 525 - -
Adu09g02494 1232 ProSiteProfiles Zinc finger PHD-type profile. 715 760 IPR019787 -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 546 580 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 1002 1077 - -
Adu09g02494 1232 PANTHER PHD FINGER FAMILY PROTEIN 962 1171 - -
Adu09g02494 1232 SMART PHD_3 717 758 IPR001965 -
Adu09g02494 1232 SMART PHD_3 759 818 IPR001965 -
Adu09g02494 1232 ProSitePatterns Zinc finger PHD-type signature. 718 757 IPR019786 -
Adu09g02494 1232 Pfam PHD-finger 718 760 IPR019787 -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 349 383 - -
Adu09g02494 1232 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 961 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 158 232 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 1 133 - -
Adu09g02494 1232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 707 834 IPR013083 -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 486 525 - -
Adu09g02494 1232 PANTHER PHD FINGER FAMILY PROTEIN 1 961 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 1014 1030 - -
Adu09g02494 1232 Pfam Tify domain binding domain 640 690 IPR032308 -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 260 333 - -
Adu09g02494 1232 Coils Coil 470 490 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 198 218 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 552 574 - -
Adu09g02494 1232 MobiDBLite consensus disorder prediction 1059 1077 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02494 Adu-Chr9 112386548 112392112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02494 4 981 PHD Transcription Factor Family AT4G14920 45.604 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu09g02494 TDBD 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02494 - - adu:107466994 1879.37