Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02475 ATGTTCTCTTCCACATATGATTCAAACCCTTTCCCTAACTTCCCTTCATCTTCTTCTTCTTCATCTTATCCTAATAATAATAATAATAATAATAATAATAATACACTCCCTTTCTACATTGATCCACATAACAACAATGATTTTGCAACCACGCTTCTTCACCATCATGATCCATCATCACTACTTGTTTCTCCCTTTATACCTTCAAGTGAAGTGCCATTCCCGTCATCAGCAGAAGAAGCTGTTGTTGTTGCAGCAATGCTTGATCAAGATGCTGCAGCAAGCAATGGCTGCTGCTATGGCGGGGGCGGAGGACTAATCTACGGTGGTGGAGGTGTTCCCAATTTGCTGACTCAGAAACCGTTAGGGAGCAGCATAGGTACGAAGAAAGATAGGCACAGCAAGATTCACACATCTCAGGGGTTGAGGGACAGAAGGGTGAGGCTTTCAAGCGAAATAGCGCGCAAGTTCTTTGATCTTCAGGACATGCTGGAGTTCGACAAGCCCAGCAACACGCTCGAATGGCTCTTCACCAAGTCTGAGAATGCAATCAAGGAGCTTGCAAGAAGCAAACATAGCTGCAGCTTCAGCTCCGGCGGCGAAAAATGCTCGTGTTGTGAAGGTAGTGATCAAGCAGCTGGGGTGGTGGTGGTGCACTCAAGCGAGAAATCATCTATGGCGGGAAGCAGTGATTCTTGTTCCAAAGGGAGGAACAAGTTGAAGTGGACACAGAGAGAAGATGTTTGTGTTCAGACAAAGAAGGAGTCAAGGGATAAAGCAAGGGCAAGAGCAAGAGAGAGAACTTGCTACAAAATGAACAACAACAACAACAACAATGGAAGATTAATGGTGCAAGATTTGGAGGACAAAACCCCTGCACTGCAACAATTTGAGCCTTGTGGAAGATGGTCTAATAACCCTCATCAGATTCTTCAACAACAACCTTACTATAACCCTCTTCGTCATCATCATCATCACATACTTGGAGATGCTTTTATTAACAATGTCATTGATGATTCTATCATGATTAAAAGGAACATGAATCGTGACCAAAACCTTATTGCTATCCCTAATAACAACAACATTATTGTTAATGATGATGAGTACCAAAACCACTCGTCACCGTTCCTTTATTCAACTACTCCAAATTGGGACACCGACGAAACCATAAATGGTTGCTCCAACTTTCGTGCAATGGCAGCCACAATGAATAATCTATCAACATGCTTCACGGACCAGTAA 1242 0.43 MFSSTYDSNPFPNFPSSSSSSSYPNNNNNNNNNNTLPFYIDPHNNNDFATTLLHHHDPSSLLVSPFIPSSEVPFPSSAEEAVVVAAMLDQDAAASNGCCYGGGGGLIYGGGGVPNLLTQKPLGSSIGTKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELARSKHSCSFSSGGEKCSCCEGSDQAAGVVVVHSSEKSSMAGSSDSCSKGRNKLKWTQREDVCVQTKKESRDKARARARERTCYKMNNNNNNNGRLMVQDLEDKTPALQQFEPCGRWSNNPHQILQQQPYYNPLRHHHHHILGDAFINNVIDDSIMIKRNMNRDQNLIAIPNNNNIIVNDDEYQNHSSPFLYSTTPNWDTDETINGCSNFRAMAATMNNLSTCFTDQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02475 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 408 IPR005333 GO:0003700
Adu09g02475 413 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 28 408 - -
Adu09g02475 413 ProSiteProfiles R domain profile. 254 271 IPR017888 -
Adu09g02475 413 MobiDBLite consensus disorder prediction 1 36 - -
Adu09g02475 413 Pfam TCP family transcription factor 128 274 IPR017887 -
Adu09g02475 413 ProSiteProfiles TCP domain profile. 129 187 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02475 Adu-Chr9 112235923 112237296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02475 128 191 TCP Transcription Factor Family AT1G67260 70.312 1.33e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu09g02475 TCP 9.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02475 - - adu:110275773 494.197