Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02465 ATGAAACTGCTCTTAAGGCCAGACAAAGACTTCAGAAGAAGCTTGCACAATTTTTTCCTTCTTCCAGACAGGGAAAATGAGAATCCAATAAGAGAAGGAAAAGTGAAGAAAGAAAAGAGAGATGAAGGAATAATAATAGGAAGGAAGCTATTATCAAATGCATGGTTAATGCGTGCTAAGAAGAACGAGAGAAAAGTGTGTGCAGTGTGCCTAGAAGATTTCCAGCAAGAGAAGCAGATTATGAACCTTTCTTGCTCTCACAAGTTTCACTCTGCATGCCTTCTCCCATGGCTTCAATCCCATCCTCACTGTCCTTATTGTCGAACCCCAGTTGATGCACACACATATACTCCTTAA 357 0.4062 MKLLLRPDKDFRRSLHNFFLLPDRENENPIREGKVKKEKRDEGIIIGRKLLSNAWLMRAKKNERKVCAVCLEDFQQEKQIMNLSCSHKFHSACLLPWLQSHPHCPYCRTPVDAHTYTP 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02465 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 114 IPR013083 -
Adu09g02465 118 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 49 110 - -
Adu09g02465 118 SUPERFAMILY RING/U-box 66 114 - -
Adu09g02465 118 Pfam Ring finger domain 66 108 IPR001841 -
Adu09g02465 118 ProSiteProfiles Zinc finger RING-type profile. 67 108 IPR001841 -
Adu09g02465 118 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 49 110 - -
Adu09g02465 118 CDD RING-H2_PA-TM-RING 66 108 - -
Adu09g02465 118 SMART ring_2 67 107 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02465 59 108 C3H Transcription Factor Family AT3G58720 42.000 1.29e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02465 - - gmx:100527548 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02465 09 112117405 112119922 Adu09g02465 09 112117405 112119922 ECH