Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02445 ATGCCAGTGAGGCAGATGAAAGAAAGCTCTGAGCAACACATTGTGATTAAACCCCATTCTCAGAACCACATGAATAAGGCACCAAAAGCTGCACAAAATGGAAAAGGACCACCACCACCACCACCATCACAAGAGAACCACCAGCACCACAACAACAACCACCACCACCACCACAACCACCAGTCATCACCTCAACCAAGAAACAAAGGGAGAAGAAGGGGCAGAGGTGGGAGAAAATCTGATCAAGGAGAGATTTTGATGAGACCAAGTTGCAGGCCCTGCACTGCTGGTGCTGCTCCTCCTCCTGTGACAGCAAATGGGATTAATAGTAATAATGTTGAGAATGGCTGCAAGATCAGTGGTGGTGGTGGTGACATAACAGACATGGGTTTTCCCACTTCAAGCAAATCCTTGAGCTTTGCTCGCAGGCCTGGCTATGGACAAGTTGGGACAAAATGCATTGTCAAGGCTAATCACTTCTTTGCTGAGCTACCGGACAAGGACTTGAACCAATATGATGTAACAATTAGCCCAGAAGTGAGTTCAAGAGCAGTAAATCGGTCCATAATAGCAGAACTTGTGAGGCTTTACAAAGAGTCTGATTTGGGGATGAGGCTTCCTGCTTATGATGGCAGGAAAAGTCTGTACACTGCTGGCCAGCTTCCCTTTGCCTGGAGAGAATTTAAGATAAAGCTTCTTGATGATAATGATGATGGAGTTAATGGCCCCAAAAGGGAAAGGGAATATAGGGTGGTGATCAAGTTTGTTGCTCGTGCAAACTTGCATCACTTGGGCCAGTTTCTAGCCGGCAAGCGAGCTGATGCACCACAGGAGGCACTTCAGATTCTTGATATTGTACTGAGAGAGCTATCAACTAAGAGGTACTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCTCAACGGCTTGGAGAGGGGTTGGAATCATGGTGTGGATTCTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGCCCTTAGAGGAGTAAAGGTTGAAGTAACACACAGAGGAAGTGTAAGAAGGAAATATCGCGTTTCAGGATTGACTTCTCAACCAACAAGAGAACTTGTGTTCCCTGTTGATGAGAACTCAACTATGAAGTCAGTGGTTGAATACTTTCAAGAGATGTATGGTTTCACTATTCAATACACTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAGGCAAACTACTTACCCATGGAGGCCTGTAAAATTGTGGAAGGGCAAAGGTATACAAAAAGATTGAATGAGAAGCAAATTACTGCACTGCTCAAAGTTACTTGCCAGAGACCGCGCGATCGCGAAAATGACATCTTAAGGACGGTGCAACATAATTCTTATAATGAAGATCCTTATGCAAAGGAATTTGGTCTTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCTTGGCTTAAATACCATGAAAGTGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGTCAGTGGAACATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCGTGCATTAACTTTTCGCGGAGCGTGCAAGATAGTGTTGCTCGCACATTTTGTCATGAGCTTGCTCAAATGTGTCAAGTGTCTGGCATGGAATTCAATCCAGAGCCTGTCATTCCCATCTACAATGCCAAGCCAGAGCAGGTAGAGAAAGCTTTAAAGCATGTTTATCATGTGTCGACGAACAAATTGTTAGCAATATTGCCTGACAACAATGGATCTCTATATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAACATGTCTTCAAGATCACCAAACAGTACTTGGCAAATGTATCTCTAAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTAGATGCTGTAAGCTGCAGAATACCGTTGGTTAGTGACATACCAACCATAATATTCGGAGCAGATGTTACTCACCCTGAAAATGGAGAAGACTCTAGCCCTTCAATAGCTGCTGTAGTAGCATCCCAGGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGACAGGAGCTTATACAAGATTTGTACAAAACTTGGCACGATCCTGTTCGTGGCACAGTCAGCGGTGGCATGATCCGAGATTTGTTGGTTTCTTTTAGAAAGGCAACAGGGCAAAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTCTCCTTTATGAATTAGATGCAATCCGGAAGGCCTGTGCTTCCTTAGAACCAAACTATCAGCCTCCGGTAACTTTCATAGTTGTACAAAAACGACATCATACACGGTTATTCGCTAACAACCACCGGGACAGGAGCAGTACAGATAAGAGTGGGAATATAATGCCTGGGACTGTTGTTGATTCTAAAATATGTCATCCAACAGAATTTGATTTCTATCTATGCAGTCATGCTGGCATCCAGGGTACAAGTAGGCCTGCCCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAATCTTTGACAAACAATCTGTGTTACACATATGCTAGGTGTACTCGATCTGTATCAGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCATTTAGAGCACGTTTCTATATGGAGCCAGATATGCAAGAGAATGACTCTACAGGTGGTGGTAACGGTGGTGGTCGTGGAGGATCGAAGGGAACTCGAGCAGCCGGAGAGTGTGGTGTGAAGCCACTGCCAGCCTTGAAAGAGAATGTGAAGAGAGTAATGTTTTACTGTTGA 2877 0.4373 MPVRQMKESSEQHIVIKPHSQNHMNKAPKAAQNGKGPPPPPPSQENHQHHNNNHHHHHNHQSSPQPRNKGRRRGRGGRKSDQGEILMRPSCRPCTAGAAPPPVTANGINSNNVENGCKISGGGGDITDMGFPTSSKSLSFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTISPEVSSRAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLLDDNDDGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQHNSYNEDPYAKEFGLKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCHELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSTNKLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNIMPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENDSTGGGNGGGRGGSKGTRAAGECGVKPLPALKENVKRVMFYC 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02445 958 Gene3D - 658 958 IPR036397 GO:0003676
Adu09g02445 958 Pfam N-terminal domain of argonaute 152 287 IPR032474 -
Adu09g02445 958 Gene3D - 487 652 - -
Adu09g02445 958 Gene3D paz domain 325 426 - -
Adu09g02445 958 SMART Piwi_a_2 589 910 IPR003165 GO:0003676
Adu09g02445 958 Pfam Argonaute linker 1 domain 297 338 IPR014811 -
Adu09g02445 958 MobiDBLite consensus disorder prediction 914 935 - -
Adu09g02445 958 Pfam Argonaute linker 2 domain 449 495 IPR032472 -
Adu09g02445 958 ProSiteProfiles PAZ domain profile. 340 423 IPR003100 GO:0005515
Adu09g02445 958 PANTHER PROTEIN ARGONAUTE 10 69 339 - -
Adu09g02445 958 SMART DUF1785_2 296 355 IPR014811 -
Adu09g02445 958 SUPERFAMILY Ribonuclease H-like 575 911 IPR012337 -
Adu09g02445 958 SMART PAZ_2_a_3 321 445 IPR003100 GO:0005515
Adu09g02445 958 CDD PAZ_argonaute_like 339 422 - -
Adu09g02445 958 Pfam Mid domain of argonaute 506 583 IPR032473 -
Adu09g02445 958 ProSiteProfiles Piwi domain profile. 589 910 IPR003165 GO:0003676
Adu09g02445 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 69 339 - -
Adu09g02445 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 339 957 - -
Adu09g02445 958 MobiDBLite consensus disorder prediction 50 76 - -
Adu09g02445 958 SUPERFAMILY PAZ domain 336 464 IPR036085 GO:0005515
Adu09g02445 958 Pfam Piwi domain 590 909 IPR003165 GO:0003676
Adu09g02445 958 Pfam PAZ domain 337 439 IPR003100 GO:0005515
Adu09g02445 958 CDD Piwi_ago-like 467 909 IPR045246 -
Adu09g02445 958 MobiDBLite consensus disorder prediction 1 98 - -
Adu09g02445 958 PANTHER PROTEIN ARGONAUTE 10 339 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02445 Adu-Chr9 111941925 111948219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02445 1 958 Eukaryotic Initiation Factors Gene Family AT5G43810 76.430 0.0 1537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02445 K11593 - gmx:100816999 1663.66