Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02430 ATGCACAAGAAATGTTTCTGTTGTTTTCTATCTGAAGAAGAGCAAAGCAAAGCAAGGAATAAAGGAGAAAAGAATAAGAATAAGGATTATCCATGGGAAATCTACACATCGAAGGAGCTGCTTGGTGCAACAAACAATTTTCACCAAGATCACAAGATCGGAGAAGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTCGAGATTGCAGTGAAGCGGTTGAAAACGATGACTGCAAAAACCGAGATGGAGTTCGCAGTTGAAGTGGAAGTACTTGGAAGGGTTAGGCATAAGAATCTGTTGGGTTTGAGGGGTTTCTACGCTGGAGGAGATGAAAGGTTAATTGTTTATGATTTCATGCCTAATCAAAGCTTGCTCACACATTTGCACGGTCACCTTTCTTCTAATTGTCTCTTAGATTGGCCTAAAAGAATCAACATAGCGATTGGTGCAGCTGAAGGTTTAGCGTATTTGCACCATGAGGCAAATCCTCACATCATACACAGAGACATAAAAGCAAGCAATGTTCTGTTAGACCTTGAATTCCAAGCCAAGGTAGCTGATTTCGGTTTCGCAAAGCTCAGACCAGAGGGTGTTTACTTATTATCTTCACACGAAAAAGAATTAGCTTACATAACTTAG 651 0.4071 MHKKCFCCFLSEEEQSKARNKGEKNKNKDYPWEIYTSKELLGATNNFHQDHKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKTEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDFMPNQSLLTHLHGHLSSNCLLDWPKRINIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDLEFQAKVADFGFAKLRPEGVYLLSSHEKELAYIT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02430 216 Gene3D Phosphorylase Kinase; domain 1 8 122 - -
Adu09g02430 216 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 208 - -
Adu09g02430 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Adu09g02430 216 Pfam Protein kinase domain 47 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02430 216 PANTHER OS01G0253100 PROTEIN 4 208 IPR045271 GO:0004714|GO:0006468
Adu09g02430 216 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Adu09g02430 216 SMART serkin_6 47 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02430 216 ProSiteProfiles Protein kinase domain profile. 47 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02430 216 SUPERFAMILY Protein kinase-like (PK-like) 29 204 IPR011009 -
Adu09g02430 216 Gene3D Transferase(Phosphotransferase) domain 1 123 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02430 Adu-Chr9 111755320 111756763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02430 26 197 Trihelix Transcription Factor Family AT4G32710 48.837 2.85e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Adu09g02430 Pkinase 4.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02430 - - gmx:100817283 350.132