Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02420 ATGCACAAGAAATGTTTCTGTTGTTTCCTATCTGAAGAAGAGCAAAGCAAAGCAAGGAATAAAGGAGAAAAGAATAAGAATAAGGATTATCCATGGGAAATCTACACATCGAAGGAGCTGCTTCGTGCAACAAACAATTTTCACCAAGATCACAAGATCGGAGAAGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTCGAGATTGCAGTGAAGCGGTTGAAAACGATGACTGCAAAAGCAGAGATGGAGTTCGCAGTCGAAGTGGAAGTACTTGGAAGGGTTAGGCATAAGAATCTGTTGGGTTTGAGAGGTTTCTATGCTGGAGGAGATGAAAGGTTAATTGTTTATGATTTCATGCCTAATCAAAGCTTGCTCACACATTTGCACGGTCACCTTTCTTCTAATTGTCTCTTAGATTGGCCTAAAAGAATCAACATAGCAATTGGTGCAGCTGAAGGTTTAGCGTATTTGCACCATGAGGCAAATCCTCACATCATACACAGAGACATAAAAGCAAGCAATGTTCTGTTAGACCTTGAATTCCAAGCAAAGGTAGCTGATTTCGGTTTCGCAAAGCTCATACCAGAGGGTGTGAGCCATCTCACAACAAGGGTTAAAGGGACACTCGGATATTTGGCACCGGAATATGCCATGTGGGGTAAAGTGTCGGAGAGTTGTGATGTTTACAGCTTTGGGATTCTTCTTTTGGAGATTGTTAGTGCCAAGAAACCAATTGAGAAGCTACCAGGTGGAGTGAAAAGGGACATTGTTCAATGGGTGACACCTTATTTCCAAAAGGGTGCGTTCAATCACATCGCGGATTCCAAGCTGAAGGGGAAGTTTGATTTGGATCAGTTGAAATCTGTGGTGATGATAGCTCTGAGATGCACCGATGGTAGCCCTGAGAAGAGGCCTAGCATGGCAGAGGTTGTGGATTGGCTTAAGGGTGCAGCTGGCAAGAGAAGAAGAGAGGTTACTCCTTCTCTAAGTTTGGGTAATGGTGATGATGAAGTGGATGACGATGATTACGGAGAGATTACACCATACCAATCCAAGTTGAAAATGGCAAGTACTGACAGTGATAGGCATAAGAGAAGATGA 1113 0.4322 MHKKCFCCFLSEEEQSKARNKGEKNKNKDYPWEIYTSKELLRATNNFHQDHKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDFMPNQSLLTHLHGHLSSNCLLDWPKRINIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDLEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPYFQKGAFNHIADSKLKGKFDLDQLKSVVMIALRCTDGSPEKRPSMAEVVDWLKGAAGKRRREVTPSLSLGNGDDEVDDDDYGEITPYQSKLKMASTDSDRHKRR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02420 370 CDD STKc_IRAK 53 320 - -
Adu09g02420 370 Pfam Protein kinase domain 47 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02420 370 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02420 370 MobiDBLite consensus disorder prediction 324 370 - -
Adu09g02420 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Adu09g02420 370 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Adu09g02420 370 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Adu09g02420 370 SUPERFAMILY Protein kinase-like (PK-like) 29 331 IPR011009 -
Adu09g02420 370 Gene3D Phosphorylase Kinase; domain 1 8 122 - -
Adu09g02420 370 ProSiteProfiles Protein kinase domain profile. 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g02420 370 PANTHER OS01G0253100 PROTEIN 4 334 IPR045271 GO:0004714|GO:0006468
Adu09g02420 370 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02420 Adu-Chr9 111560760 111562667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02420 28 341 Receptor kinase-like Gene Family AT5G45780 42.769 2.97e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Adu09g02420 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02420 - - gmx:100817283 592.808