Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02415 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGGTGATTTGAAACAAGAAGATGACAAGAAAACAAGTGAACTAGTTGTTTGCTTGGGTGAACTGTTAATAGACTTTGTACCAACGGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTAGCAGTTGGCATCTCAAGGCTTGGTGGTTCATCTGCTTTCATAGGCAAGGTAGGAAAGGATGAATTCGGGTATATGTTATGTGATATTTTAAAGCAGAACTTTGTTGATACATCTGCCGTGCGGTTTGACTCTGAAGCTAGAACTGCATTAGCTTTTGTCACGCTTAGAGCCGATGGCGAGCGCGAGTTCTTGTTTTTCCGGAACCCTAGTGCTGATATGCTTCTTCATGAGTCAGAGATTGACAAAATTCTCATACAGAAGGCTAAAATATTCCATTATGGTTCCATTAGCTTGATTCATGATCCATGCAAGTCAGCTCATCTTGCCGCGTTGCGAATCGCTAAAGAATCTGGTTGTATTCTCTCATATGATCCAAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCTCAGAAAGGTATAATGAGTGTATGGGACAAAGCTGATATCATAAAGATAAGCGAGGAGGAGATTACATTTTTGACCAAGGGTGATGACCCTAACGATGATGATGTTGTATTAAAGAAGCTTTTTCACCCTGATCTCAAGCTATTAATTGTGACACAAGGTTCAGAGGGTTGTAGATATTACACCAAGAAATTCAAAGGCCGGGTGGCAGGTGTTAAAGTTAACCCCATTGACACAACTGGGGCCGGTGATGCATTTGTTAGCGGGATTCTCTACAACATAGCTTCAGATCAAAGCATTTTACAGGAGGAGGAGCAACTCCGGAAAGCGCTACGATTTGCCAACATATGTGGTGCCATCACTGTGACAAAGAGAGGTGCAATTCCCGCACTACCTAACAAAGAAGCTGTTGCGCAGTTCATGTTAGAAGCAACAACCATTAACACTTGA 1044 0.4349 MAQFTPSGKSGDLKQEDDKKTSELVVCLGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGKDEFGYMLCDILKQNFVDTSAVRFDSEARTALAFVTLRADGEREFLFFRNPSADMLLHESEIDKILIQKAKIFHYGSISLIHDPCKSAHLAALRIAKESGCILSYDPNLRLALWPSAEAAQKGIMSVWDKADIIKISEEEITFLTKGDDPNDDDVVLKKLFHPDLKLLIVTQGSEGCRYYTKKFKGRVAGVKVNPIDTTGAGDAFVSGILYNIASDQSILQEEEQLRKALRFANICGAITVTKRGAIPALPNKEAVAQFMLEATTINT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02415 347 CDD bac_FRK 24 326 - -
Adu09g02415 347 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Adu09g02415 347 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Adu09g02415 347 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Adu09g02415 347 Gene3D - 20 345 IPR029056 -
Adu09g02415 347 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Adu09g02415 347 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Adu09g02415 347 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Adu09g02415 347 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Adu09g02415 347 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Adu09g02415 347 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02415 Adu-Chr9 111524193 111526672 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02415 K00847 - gmx:100818404 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03277 05 105073525 105083406 Adu09g02415 09 111524193 111526672 ECH
Adu09g02415 09 111524193 111526672 Adu09g02415 09 111524193 111526672 ECH
Adu05g03277 05 105073525 105083406 Adu09g02415 09 111524193 111526672 PCT