Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02409 ATGGAAGCGAATCATGGCGGTTTCAGCGAAGAACCGAACGACACTCAAAGCGCCGACGTATCACCCTCTGAGAAAACGCCAATAGCGAAAGCGCCGGAACCTAGGTTCCCGGAGCCGGTACCTCCGTCTCCGGTGACGGTTCCTATGAAGGAGGAGCTCGCGGACTCCGAGAGGAGCCTTGAGGAGCGTCTCCAGGTGGCGATTGTTCCCACGCCGGTGGCAAGGAGGCCGTCGAAGGACCGCCACACGAAGGTAGAGGGGCGCGGCCGGAGAATCCGGATGCCGGCGACGTGCGCCGCCAGGATCTTCCAGCTGACACGGGAGTTAGGCCACAAGTCCGACGGGGAAACAATACGGTGGCTGCTGGAACAGGCTGAGCCGGCCATCATCGAGGCCACCGGTACAGGAACGATCCCGGCAATCGCGGTTTCGGTGGGTGGCACACTCAAGATCCCAACGACGTCGACGGCGACGCCACAAGGCGAAGAAGAGGCGTCGAGAAAACGAAGAAGAAGGGCATCGAACAGCGAGTTCATTGATGTGAATGAAGAACAACAATCCTCAGTGTCTTCGGGTCTCGCACCAATCACACAAACCGCATACGGCGCTAGTTCTAGTGGTGGTGGACTCGTTCCAATGTGGACTATTGGTGGCGGCGGTGGTGGTTCTAATGGTCCTTTTTTCATGTTCCCAAATGCTGCTGCTACTTCTTCCGGGGATGGTGTTGCGAACCATCCTCATTATTGGGCTTTTCCAGCGAATGCGGCGCCGTATTTCAACGTTCAAGCTCGGCCTATTTCGGGGTTTGTTGCGGCTGAGCAATTAGGCCATGTGGTAGTGCAGCAGCCGCAGCCGCAGCCGCCGCCGCCGCCTAGTTGTTGTTCTTCTAATGGCTCTGCTAACTCTTGTTCTACTCTGGCTCCTAGTTTGAGCTCTGGAACCAGTGCTACTAATAATGGCTCTACTTCTACTTCTAGTGCTGCCACTCAGATGCTTAGGGATTTCTCTTTGGAGATTTACGACAAGAAAGAGTTGCAATTCTTGGCTTGCTCTTCCTCTTCTTCTGCCGTTGCTGAAGCTAAGTTGGAACAACCACCACCTCAGACTCTCAGTTCTAAGCCTTCAAACTGA 1131 0.5535 MEANHGGFSEEPNDTQSADVSPSEKTPIAKAPEPRFPEPVPPSPVTVPMKEELADSERSLEERLQVAIVPTPVARRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAIAVSVGGTLKIPTTSTATPQGEEEASRKRRRRASNSEFIDVNEEQQSSVSSGLAPITQTAYGASSSGGGLVPMWTIGGGGGGSNGPFFMFPNAAATSSGDGVANHPHYWAFPANAAPYFNVQARPISGFVAAEQLGHVVVQQPQPQPPPPPSCCSSNGSANSCSTLAPSLSSGTSATNNGSTSTSSAATQMLRDFSLEIYDKKELQFLACSSSSSAVAEAKLEQPPPQTLSSKPSN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02409 376 MobiDBLite consensus disorder prediction 305 327 - -
Adu09g02409 376 PANTHER TRANSCRIPTION FACTOR TCP9 19 353 - -
Adu09g02409 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 353 IPR005333 GO:0003700
Adu09g02409 376 MobiDBLite consensus disorder prediction 162 178 - -
Adu09g02409 376 MobiDBLite consensus disorder prediction 9 23 - -
Adu09g02409 376 MobiDBLite consensus disorder prediction 150 191 - -
Adu09g02409 376 Pfam TCP family transcription factor 78 168 IPR017887 -
Adu09g02409 376 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Adu09g02409 376 MobiDBLite consensus disorder prediction 1 59 - -
Adu09g02409 376 MobiDBLite consensus disorder prediction 32 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02409 Adu-Chr9 111480891 111482474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02409 72 348 TCP Transcription Factor Family AT5G51910 49.301 1.28e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu09g02409 TCP 4.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02409 - - ahf:112711692 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02409 09 111480891 111482474 Adu09g02409 09 111480891 111482474 ECH