Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02403 ATGGATGATGGTAACAACCCTCTACCACCACCTCTTCCTCCTCCGATACAAATCCCACCACCCACTACTCCAGCCCCAATCTCATCGTCCTCTTCCCCCTCTTCTACCGTGCGGTACCGGGGGACACGCTGCCGGAGTGGCAAGTGGGTGTCGGAGATAAGGGAGCCACGCAAGACGACGCGCATTTGGCTGGGGACATACCCAACACCTGAGATGGCTGCTGCTGCCTACGATGTTGCTGCTCTTGCCTTGAAGGGTCCCGATGCGCCTCTCAACTTCCCCGATTCCGTACTCTCTTACCCTATTCCTGCCTCATTGTCTCCTCCTGATATTCGCGCAGCAGCCGCCGCTGCCGCCGCTCAGGCTAGGCTTCCGAAGCCACCGCAGAACCCTCTAGAAGGTAGTGATAGTGCTGGTGGTAGTGGTAACGTTATTGTTGAAGGGTCTTGTTCCAGTTTGAGTACTGGAGAACAAGGAGGGATGATGGTGGCGGAGTACATTGACGAGGATGAGCTTCTGAACATGCCGAGTGTCATCGAAGACATGGCCAGGGGAATGCAGGTCTTACAACAAACAAAGCCTAGACAATTTCGATTGTTTTTGCTGTTGCTGCTCTTGCTGTTGTTCTTGTTGTTGTTGTAA 642 0.5389 MDDGNNPLPPPLPPPIQIPPPTTPAPISSSSSPSSTVRYRGTRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDAPLNFPDSVLSYPIPASLSPPDIRAAAAAAAAQARLPKPPQNPLEGSDSAGGSGNVIVEGSCSSLSTGEQGGMMVAEYIDEDELLNMPSVIEDMARGMQVLQQTKPRQFRLFLLLLLLLLFLLLL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02403 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 33 189 - -
Adu09g02403 213 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Adu09g02403 213 ProSiteProfiles AP2/ERF domain profile. 38 94 IPR001471 GO:0003700|GO:0006355
Adu09g02403 213 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Adu09g02403 213 MobiDBLite consensus disorder prediction 1 42 - -
Adu09g02403 213 MobiDBLite consensus disorder prediction 118 139 - -
Adu09g02403 213 MobiDBLite consensus disorder prediction 1 27 - -
Adu09g02403 213 Pfam AP2 domain 43 86 IPR001471 GO:0003700|GO:0006355
Adu09g02403 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 33 189 - -
Adu09g02403 213 SMART rav1_2 38 100 IPR001471 GO:0003700|GO:0006355
Adu09g02403 213 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02403 Adu-Chr9 111384286 111385093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02403 39 186 AP2-EREBP Transcription Factor Family AT5G52020 53.896 6.78e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu09g02403 AP2 5.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02403 - - ccaj:109807514 186.037