Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02402 ATGAGCCGCCATAGGAACCCAGCACAAACTTGCCCTCCCACTAATCAACTCCCCTATGGCTATGGCTATGTACCATCACCACCAGCAGCCACGCCTCCAACTTGGTCATCATCCCCTTCCCACTCCGGCACCATGCGCTACAGGGGCACGCGTCTCCGAAGTGGGAAGTGGGTGTCGGAGATAAGGTTACCACGTACCACAAAGCGCATTTGGCTGGGGACATACGCAACGCCTGAGATGGCTGCTGCTGCTTACGATGCTGCTACTCTTGCACTGAGGGGCCCCGAAGCCCATCTCAACTTCCCCAATTTCATACTCTCTTACCCTATTCCTGCTTCATTCTCCGATGCTGATATTCGCGCTGCCGCTGCCGTCGCCGCCTCCTTCGTCGATCAGTATAGGACTACCACCGAGGCGCCACCAGCGATTACTACTTCTGCTGTTGCTGATGCCTATTCCTACAACAGTTGTATCGGACAAGGAGAAGGGATGATAGGAGATTATTTTGATGAGGATGAGCTGTTGAATATGCCGAGTGTGATCCAAGACATGGCCAGAGGACTGCAGATTAGCCCCCCAAGGATGCCTTCTTTCTACTCCGATGATTCCTCCGATGACATTTATTCGGACCTGTATACCCTTTGGTAA 648 0.5309 MSRHRNPAQTCPPTNQLPYGYGYVPSPPAATPPTWSSSPSHSGTMRYRGTRLRSGKWVSEIRLPRTTKRIWLGTYATPEMAAAAYDAATLALRGPEAHLNFPNFILSYPIPASFSDADIRAAAAVAASFVDQYRTTTEAPPAITTSAVADAYSYNSCIGQGEGMIGDYFDEDELLNMPSVIQDMARGLQISPPRMPSFYSDDSSDDIYSDLYTLW 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02402 215 CDD AP2 46 103 IPR001471 GO:0003700|GO:0006355
Adu09g02402 215 SMART rav1_2 46 108 IPR001471 GO:0003700|GO:0006355
Adu09g02402 215 ProSiteProfiles AP2/ERF domain profile. 46 102 IPR001471 GO:0003700|GO:0006355
Adu09g02402 215 Pfam AP2 domain 47 94 IPR001471 GO:0003700|GO:0006355
Adu09g02402 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 40 208 - -
Adu09g02402 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 40 208 - -
Adu09g02402 215 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Adu09g02402 215 SUPERFAMILY DNA-binding domain 47 103 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02402 Adu-Chr9 111350984 111351738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02402 47 215 AP2-EREBP Transcription Factor Family AT5G52020 48.000 1.26e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu09g02402 AP2 2.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02402 - - adu:107483526 178.718