Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02385 ATGCTCATTCTCATTCTCCATCAGCATGGCAATGGCACAGAGGCACAGTCCCCGCTCCAGCCGGTGAAACCGCTTTCCTCCAACCACAACCCCCGGGACCCTTCAACCGTCCTCTTCATCGCCACCATCCTCGGAACCTTCATATTCGTCGCCGCGTTCGTAGCCTTCCTCCGCCGCTGCACAGAGCCGTACTTTACTCAACAGCAGAGCAATATCACACACTTGCGCTGTTCCTGCTGCAACGGCGGCATCAGCCCCGACATCCTCGAAACCTTCCCCATCGTGTTCTATTCCAGCATCAAGGACCTCAGAATCCGCAAAGAAGCTCCGCTAGAGTGTGCCGTCTGCCTCACCGAGTTCGCCGGCAACGACACTCTTCGGCTGCTTCCACACTGCAACCACGTGTTCCACCCTCCCTGCATCGACGCCTGGCTCTCTTCCCACGTCACCTGCCCCGTTTGCCGCGCCAATCTCAACCAACATCCCTCCCAAGTCGCCATTTCGGTGATAACACAATTGAGCGGCTACGGAGAAGAAGAACACGAAGAAGACGGTTCTGGAAACAGAGCAGAACAGAGCGTGGGTGGCGAGAGCATAATTGAGGGGAGCCCGTTGGCGCGTGACGCGAGTGAGGGACAGCGGAACAACGAAGAAGATAAAGGGATGCCGGAAAGAGCGGCAAAAGGGAAGCTTGGTGGGAAGGGGAGGGTTCTGAAGAGGTCGAATACGACGGGGCACTCGGTGGTGGAGGCAGGAGAGTGTATGGAGAGGTATACGCTGAGGTTGCCGGAGGATGTGAGGAGGTACATTATGGTGAACCATGGGGTGATGATGACGCAGCGTTCGGCGAGCTACAACGCGGCGGAGAGTTCGAAGAAAGGATTGTGTTGGAGTGACACGGAAGGAGGTAGCAGCAGAGGTAAGAAGTGTCAGAGCTCTGTTACAGGGAAGGGAAGAGTATGGAAGAATAATGGAGAGGGGACAGCGCGTGCGTACGACGCAGCGGCAAGAGACATCCACAGCGCCAAGGCGAAGACCAATGTTCCGATGGCGGAGGAGCTTCTGAACAACAGCAACAACTTCGTTCACATTAACAACACATGTAGCCCGAGTCAGAGTAGCACGCTTGATTCATCTTCGCGGTTGCCGCCACCGCCACCATCAGTGCAGTCCAAGTCGCAGTGCACGCTGAAACCGTTTTTTCCGCCTTTACTTCTGCAGTCATGGCGTTCACAGCTGCGCGTCCTATCATGTTTTTTAAAATGTTACATTGTGCGACGGATCGAGAATAAGCCACCAGCGAGATGTGTCTCATAG 1317 0.5543 MLILILHQHGNGTEAQSPLQPVKPLSSNHNPRDPSTVLFIATILGTFIFVAAFVAFLRRCTEPYFTQQQSNITHLRCSCCNGGISPDILETFPIVFYSSIKDLRIRKEAPLECAVCLTEFAGNDTLRLLPHCNHVFHPPCIDAWLSSHVTCPVCRANLNQHPSQVAISVITQLSGYGEEEHEEDGSGNRAEQSVGGESIIEGSPLARDASEGQRNNEEDKGMPERAAKGKLGGKGRVLKRSNTTGHSVVEAGECMERYTLRLPEDVRRYIMVNHGVMMTQRSASYNAAESSKKGLCWSDTEGGSSRGKKCQSSVTGKGRVWKNNGEGTARAYDAAARDIHSAKAKTNVPMAEELLNNSNNFVHINNTCSPSQSSTLDSSSRLPPPPPSVQSKSQCTLKPFFPPLLLQSWRSQLRVLSCFLKCYIVRRIENKPPARCVS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02385 438 SUPERFAMILY RING/U-box 112 163 - -
Adu09g02385 438 Pfam Ring finger domain 112 155 IPR001841 -
Adu09g02385 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 164 IPR013083 -
Adu09g02385 438 CDD RING-H2_PA-TM-RING 112 155 - -
Adu09g02385 438 MobiDBLite consensus disorder prediction 176 239 - -
Adu09g02385 438 MobiDBLite consensus disorder prediction 370 393 - -
Adu09g02385 438 MobiDBLite consensus disorder prediction 211 231 - -
Adu09g02385 438 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 289 - -
Adu09g02385 438 PANTHER RING FINGER DOMAIN-CONTAINING 11 289 - -
Adu09g02385 438 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Adu09g02385 438 SMART ring_2 113 154 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02385 Adu-Chr9 111151425 111153462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02385 1 294 Rapid Response to Elicitors AT3G05200 33.000 7.57e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02385 K10664 - gmx:100782532 214.927