Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02376 ATGGGAAAAGCACCGTGTTGTGACAAACATGGAGTGAAGAGGGGATCTTGGACACCTGAAGAAGATGAGGCTTTAGTTGAGCATATCAAGAAGCATGGAGAAGGAAGTTGGCGCACTCTCCCCAAACATGCAGGACTACAGCGATGTGGAAAAAGTTGTAGGCTGAGGTGGATTAATTATCTACGACCTGGCATTAAGCGTGGCCCATTTACCTCTGAAGAAGAGACTAATATCATTCAACTTCATGCCTTGCTTGGCAACAGGTGGGCTGCTATAGCTTCTCAACTGCCAGGAAGAACAGACAATGAGATCAAGAACTATTGGAACACCCATCTAAAGAAAAATCTTCATCACCACTCCGGAGGGACTACACAACCTTGTCTCAGCCCTCATGCAGGGATTGTCAAGTCGGAATCTCCTTCGACTCGGCACATGGTACAATGGGAAAGTGCTAGAGTTGAGGCTGAGGCAAGCTGCAAACCAAAGCTTGAATATGACACAGGTGGATCAGATTCCGGCAACTATGAGTACCTTGATACTTCTGATTCCGCATTCAAACAATATCTGGATATGCCTGATGAAGATATAGAATTCTTGGACCACACTGACAGTTTCCTGAACCCTCCTGATGATGATGAGGAGGAGGAGGATGATAGATGTGACTAA 666 0.458 MGKAPCCDKHGVKRGSWTPEEDEALVEHIKKHGEGSWRTLPKHAGLQRCGKSCRLRWINYLRPGIKRGPFTSEEETNIIQLHALLGNRWAAIASQLPGRTDNEIKNYWNTHLKKNLHHHSGGTTQPCLSPHAGIVKSESPSTRHMVQWESARVEAEASCKPKLEYDTGGSDSGNYEYLDTSDSAFKQYLDMPDEDIEFLDHTDSFLNPPDDDEEEEDDRCD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02376 221 CDD SANT 69 112 IPR001005 -
Adu09g02376 221 CDD SANT 16 61 IPR001005 -
Adu09g02376 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Adu09g02376 221 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 158 - -
Adu09g02376 221 Gene3D - 14 66 - -
Adu09g02376 221 MobiDBLite consensus disorder prediction 207 221 - -
Adu09g02376 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Adu09g02376 221 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu09g02376 221 Gene3D - 69 132 - -
Adu09g02376 221 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu09g02376 221 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu09g02376 221 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu09g02376 221 MobiDBLite consensus disorder prediction 200 221 - -
Adu09g02376 221 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 158 - -
Adu09g02376 221 SMART sant 66 114 IPR001005 -
Adu09g02376 221 SMART sant 13 63 IPR001005 -
Adu09g02376 221 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02376 Adu-Chr9 111079558 111080987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02376 1 157 MYB Transcription Factor Family AT3G61250 71.429 5.57e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g02376 Myb_DNA-binding 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02376 K09422 - gmx:100782075 272.707