Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02358 ATGTCAGAATCTGAAGAAGATAAAACAGACTTTGCTTCTCTAAAGTCAAAGGAGGACCAACAACAATCACCACCTCAACTTCCTCCTCCTTCCGCCATGGATTTCGATCTGGACTTGGAAACTTCGTGGCCTTTGGATCACTTGTCCTTCGTCTCCAATAACCCCATGTCACCTTTTCTGTTCCCAATCTCATCTGAACAACCTTCTTCTCCTCTTTGGCTCTTCTCTGATGCAGAAGATGAAAGGCACAACAACACTCTTGCTTCAGCTCCAGCTTTCTCTGATTTCCACAAGATATTCTCTTGTGATTCAAACTCAGTAACTGAAAAACCAGTGGAGAATGCTAATGATGAAGACAAGAAACTGTTGCCACCCATAGTGGCTATGCCACCATTGGAAATTTTGGATAGATATTGTGTAATAAAGGAAAGGATGACACAAGCGCTTCGATACTACAAAGAGTTGACAGAACAGAATGTTCTGGCGCAGGTTTGGGCACCTGTTAGAAATGGTAATAGGTTTGTGCTTACAACTTCAGGTCAACCATTTGTTCTTGATCCACATAGTAATGGACTCCACCAGTATCGAACGGTGTCCCTGATGTATGTGTTTTCGGCGGATGGAGAGAAAGAAGAAAGTCTTGGACTTCCTGGTCGAGTTTATCAGCAAAAAGTACCAGAATGGACACCTGATGTTCAGTATTATTCTACTAAGGAGTATCCTCGCAGAGATCATGCACAACATTACAATGTCCGCGGTACCTTGGCTTTGCCTGTCTTTGAACCTTCAATGCAGTCTTGTGTAGGTGTGTTGGAGTTGATCATGACTTCACAGAAGATTAACTATGCTCCTGAAGTTGACAAAATTTGCAGAGCCCTTGAGGCAGTGAATTTGAAGAGTTCAGAAATTTTAGGCCACCAATACACTCAGATTTGTAATGAAGGCCGCCAGAATGCGCTAGCAGAGATCTTGGAGATATTGACAGTGGTTTGCGAAACTCACAATTTACCTTTGGCGCAAACATGGGTTCCATGTAGGCATCGGAGTGTTCTGGCCCATGGAGGTGGCCTAAAGAAAAGTTGTTCAAGTTTTGATGGTAGTTGCATGGGGAAAGTTTGCATGTCTACAACTGATATAGCATTCTATATCATAGATGCTCATTTATGGGGTTTCCGAGAGGCCTGTGTCGAACATCACTTACAGCAAGGTCAAGGGGTTGCTGGCAGGGCTTTTTCTTCACATAGCATGAGCTTCTGTAGGAACATTACCCGATTCTGCAAAATTGATTACCCTTTAGTTCATTACGCTCTCATGTTTGGGTTAACTAGCTCCTTTTCAATCTGTTTGCGAAGCTCGCACACCGGAGATGATGACTATGTATTAGAGTTTTTTCTGCCACCTAGGATCACAGACTTTAACGAACAGAAGGCTTTGTTGGGATCCATATTGACAATAATGAAACAACATTTCCAGAGCCTTAAGATTGCTTCTGGTGTTGAACTTGAACAGAATGCTTTGGTTGAAACTATTGAAGCAACAATTGAAGGAGTTCATCTGAGGTTTGAATCTATTCCAGTTAGACAGGATGCTTCACCAAACGTGAGGGAGGAATTGGCACAAGATCCGTCGTTGCAGAAAATAATGATGGGCTGCAATGATGGAGGGAGTATTGGTGATCAGATACCCTCCTTAGAAACCAAAAACACAAATAAGCCATCAGAGAGGAAACGTGGGAAAACTGAGAAATCAATAAGTCTTGAAGTTCTGCAACGTTATTTTGCTGGGAGTCTTAAGGATGCTGCAAAGAGCCTTGGTGTTTGCCCCACTACAATGAAGCGCATCTGCAGGCAGCATGGGATATCCCGTTGGCCATCTCGAAAGATCAACAAAGTTAACCGTTCCCTGTCCAAGCTCAAGCGTGTTATTGAATCAGTCCAAGGTGCCGAAGGAGCATTCGCTTTGAATCCTCTGAGCACAAGTCCTCTTCCCTTTCCTGAGCATTCTACTCCAAACAAGTTCAGCCAGCAAGCCTCTCCAACTGAACCTCAGATAAGAGAAAATGAATTAGATGCCTCTAAAGTTTTAGAAACAACCAGAATTGCCAGAGCACAGTGTCTCGAGAAAATGGTTAATGATAAAAGCGGTTCTATTCGGGAGGTAGGGAAGGAAACAAAGGGGCCTAGAGCAAAGAGTTGCTCTAGTGCAGATAGCACAAATCCTACTTCTCATGGTTCATGCCATGGTAGCCCTCCTATCGAAAGCTCGCCCGTAAAAGATATATTCATTACATCAAACAATGATCAATGTGTTGGTCTAAGGTCACCAGAGGCAACAATGCAGCCGCCGAATAATACACTGAGCTACCCAACGACTTGCACTATGCCTGATATGGTGGCAACAGAACTTCAAGAGCCATTCGGAGGAATGCTGGTAGAAGATGCCGGAAGTTCCAAAGACTTGAGAAACCTATGTCCTTCTGTAGCTGAGGCAATTGTGGAGGACATGGCCCCGGAACCTTGCCGGACTAATCCTCCATTTTCTGGGTTGGCTCCCAAGCAATGCATGGATCCCCTTAAGGAGACAGTGACACCTTTTGCAGCTAGAATAGAAATGAAGACTGTCACTATTAAGGCAACATATAGAGAAGATATCATAAGGTTTAGGGTTTCTTTGAATTGTGGAATTGTGGAACTGAAAGAAGAAGTTGCCAAAAGGTTGAAACTAGAAGTAGGTACTTTTGATATCAAGTACCTTGATGATGATCATGAATGGGTTTTGATAGCATGTGATGCAGATCTACAAGAGTGCATAGATGTTTCAAGATCATCAGCAAGTAACATAATAAGAGTTTTGGTGCATGAAATAACTTCCAATCTTGGAAGCTCATGCGAGAGCTCAGGGTAG 2904 0.4325 MSESEEDKTDFASLKSKEDQQQSPPQLPPPSAMDFDLDLETSWPLDHLSFVSNNPMSPFLFPISSEQPSSPLWLFSDAEDERHNNTLASAPAFSDFHKIFSCDSNSVTEKPVENANDEDKKLLPPIVAMPPLEILDRYCVIKERMTQALRYYKELTEQNVLAQVWAPVRNGNRFVLTTSGQPFVLDPHSNGLHQYRTVSLMYVFSADGEKEESLGLPGRVYQQKVPEWTPDVQYYSTKEYPRRDHAQHYNVRGTLALPVFEPSMQSCVGVLELIMTSQKINYAPEVDKICRALEAVNLKSSEILGHQYTQICNEGRQNALAEILEILTVVCETHNLPLAQTWVPCRHRSVLAHGGGLKKSCSSFDGSCMGKVCMSTTDIAFYIIDAHLWGFREACVEHHLQQGQGVAGRAFSSHSMSFCRNITRFCKIDYPLVHYALMFGLTSSFSICLRSSHTGDDDYVLEFFLPPRITDFNEQKALLGSILTIMKQHFQSLKIASGVELEQNALVETIEATIEGVHLRFESIPVRQDASPNVREELAQDPSLQKIMMGCNDGGSIGDQIPSLETKNTNKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFALNPLSTSPLPFPEHSTPNKFSQQASPTEPQIRENELDASKVLETTRIARAQCLEKMVNDKSGSIREVGKETKGPRAKSCSSADSTNPTSHGSCHGSPPIESSPVKDIFITSNNDQCVGLRSPEATMQPPNNTLSYPTTCTMPDMVATELQEPFGGMLVEDAGSSKDLRNLCPSVAEAIVEDMAPEPCRTNPPFSGLAPKQCMDPLKETVTPFAARIEMKTVTIKATYREDIIRFRVSLNCGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECIDVSRSSASNIIRVLVHEITSNLGSSCESSG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02358 967 MobiDBLite consensus disorder prediction 1 35 - -
Adu09g02358 967 ProSiteProfiles PB1 domain profile. 873 955 IPR000270 GO:0005515
Adu09g02358 967 MobiDBLite consensus disorder prediction 1 15 - -
Adu09g02358 967 CDD PB1_NLP 874 954 IPR034891 -
Adu09g02358 967 SMART PB1_new 873 955 IPR000270 GO:0005515
Adu09g02358 967 MobiDBLite consensus disorder prediction 714 758 - -
Adu09g02358 967 SUPERFAMILY CAD & PB1 domains 870 958 - -
Adu09g02358 967 MobiDBLite consensus disorder prediction 557 581 - -
Adu09g02358 967 ProSiteProfiles RWP-RK domain profile. 570 651 IPR003035 -
Adu09g02358 967 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 21 966 - -
Adu09g02358 967 MobiDBLite consensus disorder prediction 661 685 - -
Adu09g02358 967 MobiDBLite consensus disorder prediction 659 686 - -
Adu09g02358 967 Pfam RWP-RK domain 583 631 IPR003035 -
Adu09g02358 967 MobiDBLite consensus disorder prediction 730 749 - -
Adu09g02358 967 Pfam PB1 domain 873 954 IPR000270 GO:0005515
Adu09g02358 967 PANTHER PROTEIN NLP8 21 966 IPR045012 GO:0003700
Adu09g02358 967 Gene3D - 870 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02358 Adu-Chr9 110779536 110783630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02358 275 967 NLP Transcription Factor Family AT4G24020 53.070 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu09g02358 PB1 9.5e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02358 - - aip:107618129 1929.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03392 05 106336853 106340993 Adu09g02358 09 110779536 110783630 PCT